Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09109 ATGGCGGAATCATCCACCTCTTCACCGTCACTTGATTTCAGAGACAAGTTATGGAAAGGGATATTTGCTGTCTCTGGAATCATGGTTACCCTCGTCACTTATGGTGTCTTGCAGGAAAAGATCATGAGAATACCATATGGAGCAGAAAAGGAGTATTTCAAGTATTCACTCTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGCTGGTTTTTTGCTGGCAAGTAAAAAAGCAATGGATCCAGTAGCTCCCATTTATAAGTATTGCCTTGTGTCTGTATCAAACATACTAACCACAACTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACTCTTGCAAAGTGTGCGAAAATGATACCAGTTATGGTCTGGGGTACCCTTATCATGCAGAAGAGATATCGGGGACCTGACTATTTGCTGGCTTTTTTTGTTACCCTTGGCTGCTCAGTATTTATTCTATATCCGGCAGGAACAGACATAAATCCATACAGTAGAGGAAGGGAAAATACAGTTTCGGGCGTTCTCCTAATGATTGGCTATCTTGGGTATCGCTACAGAACTTAA 585 0.4154 MAESSTSSPSLDFRDKLWKGIFAVSGIMVTLVTYGVLQEKIMRIPYGAEKEYFKYSLFLVFCNRITTSAVSAGFLLASKKAMDPVAPIYKYCLVSVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKRYRGPDYLLAFFVTLGCSVFILYPAGTDINPYSRGRENTVSGVLLMIGYLGYRYRT. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09109 194 Pfam UAA transporter family 20 188 IPR013657 GO:0055085
Seca4g09109 194 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 15 189 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09109 Seca-Chr4 216118587 216127852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09109 14 190 Organic Solute Cotransporters AT5G59740 81.921 2.01e-108 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09109 K15276 - gmx:100782989 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03938 4 69501951 69508201 Seca4g09109 4 216118587 216127852 PCT