Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09083 ATGAAAGTGATGATGAGGTTGAACATGGCATTACCACCTTTATGGCGAGACTGTCTCTCTTCTGCGTTCCGAACCGCCTTAGCTTGCACCATAGTAGGCGGTATCACCCTCTACGGACCACCTTCCATTCGGAACCTCATATCCTTCCCTGCATTCTCATACGTCGCACTCATTCTCATTATCATAAACGACGCCACTTTGGGTGACACCTTGCGTGGCTGCTGGCTCGCACTTTATGCTACTATTCAGAGCATAGGTCCCGCCATGTTGAGCTTGTGGGTTATCGGACCGACCAGGTTCACTAAGGGCACCACCGCTTTGGCGGTGGCGCTTGCAGCATTCGTGGTGGTGCTGCCTTCGGGTCAATTGGTAGCGAAACGGATATCACTGGGTCAGATAGTGTTGTTGTATGTGGTGGGTTATGCTAAAGGCAGTGAAACGGATCCTCTCATGCACCCTATCCGTTTAGCAGCTAGTACTGCCTTAGGAGTCTTGGCTTGCGTTCTCGCATTGTTGCTTCCCTATCCACGTCTTGCCTGTTACCAGGTGAATCAAAACTACAAGTTGTTAACAAGTAATATCTTGAAGAGATTGAAGCTTCTTGTAAAGGTAATAAGCGAGGAGGACAAGACTTGTGCACTCGGATTAATCACTCGTGCCAAGTCTTTGGCAACTACAAGAACCAAGCTCCTTTCAGTCATCATGCGCTACCAAGATGGCATGCAGTGGGAGAGATTTCCAATTAAATTTTTCAGACCACATAGCATGACCCTGGGAGAGAGACTTCAAGAGGTAGACACCAACCTGAGAGGGATGGAATTAGCTTTAAGTAGCACCAATTCATTCCCAATAAACACTCTCGATGAAGACCTTAAACATGGTCTTAACAGGCTTGAGGAGCATGTTAGCCTAACCATTAAAAATGCTAAACACGGCTTGCTTGGTGGTTCACTCACTGTTCCCGAATCCAATGCAAAAACCATAACGCATTTTCTCCAATCCCTTCACACCATTCCAACAACTCGCCAAGAATTACCCATCTATTTCTTCTTATTTTGCGCCAAACTCCTTCACAAGAAATCATCTACCGAACCTACACAAGATAAGCCCGTCCAGAAAAGCGGAAAATTTCCGGAGGGAAAAGAAAAGTGGGCTAATTGGGCCACATCAATAAGAATGACAAATCTCATGCCGGCAATTAAGTTCTCTTTCTCCTTGGGCCTTGCAATCTTCATGGGCTTACTATACAGCAAAGAGAATGGATTCTGGGCTGGGCTTCCAGTTGCCGTGAGCTATGTGTCCGGAAGGGAAGCTACATTTAGAGCAGCGAATGTTAAAGCCCAAGGGACTGTGATAGGAACTGTGTACGGGGTGGTGGGTTGTTTCGTGTTTGAGAGATTCATGCCGATTAGATTTTTTTCTCTCCTTCCCTGGTTCATTTTCGCCAGCTTCCTTCAGCGAAGCCGAATGTATGGCCCAGCTGGTGGCATTTCTGCAGTGATTGGGGCTGTTTTAATTCTTGGTAGGAAAAACTTTGGCCCACCCAGCGAGTTTGCTATAGCGAGAATCATTGAAACCTTCATTGGGCTTTTGTGTTCTATTTTCGTGGATCTTATCTTCAGGCCCAAGCGGGCTTCTGCTTGCGCTAAAATAGAGCTCTCTCAATGCCTGGCCACGCTTGGTGAGTCAATAGAGTCGTTGACTCTACATGCGGTTCCTGGCAAAACCAATTTGGAGGATAACCAAAAGAGGTTGAAAATGCAAGTTAACGAGTTAAGGAAATTTGTTGTAGAAGCAGAAGTGGAGCCCAATTTTTGGTTTTTACCATTTCACAGTGGTTTCTATAATAAGCTTTTGGCGTCATTGTCAAGGATGGTGGATCTCTTGCATTTTGGAGCATGTGCATTGAATGTCCTCCAACAAGAATTTCAAAGCGGTGAAGCTTCTGGGAAAGAGGATGTGAACATGCTACAAGGTGAAGTTGGAGACATTAAGGAATTGATTTGCTCTTCGATCAAGAGTCTTGAAGAAATTTGTAGGATGAAATCGTTAGGGTTTGTTGAGAAAGAGCTTGAGAAGAAGAAGATCTCTTATGATATTGAATCAGGGAAATCAAGAGAGTGTAAGACGTGCATGGTTTCGGGTTTAGGTGAAGATGGAATAGGAGAAACCGTAGGGTCTTTTCTCCAACTGTCAAGAGATGCTGTTGATAAGTTATATGGTGATGAAGGGGAGAAGGAGGTGAAGAGTGAAGTTGTTTTGAGTTTGAGCGCCTTGGGGTTCTGCTTGAGCGCATGTATGCAGGGGACAGTTGAAATTGAAGAAGCAATCAGGGAACTTGTTCAATGGGAGAATCCCTCTAAGGTGTCGACAATGGCAACGAATTCTTCCAATGGAGAGCAACAAACATCAAAGCAACCTCCCTTGCCATCTCCTTTGCGCTTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTCACGGGAGGAGCTGGATTTATTGGCTCTCACCTTGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTAATTGTTGCTGATAACTTCTTCACTGGATCCAAAGACAACCTTAGAAAATGGATTGGTCATCCCAGATTTGAGCTAATTCGCCATGATGTGACAGAGCAACTGTTGGTTGAGGTTGATCAGATCTACCATCTTGCATGCCCGGCTTCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACAAATGTAATTGGAACACTAAACATGCTAGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTGTGCATCCACAACCAGAAAGCTATTGGGGCAATGTTAATCCTATTGGAGTTCGGAGTTGTTATGATGAGGGAAAGCGTGTGGCAGAAACATTGATGTTTGATTATCATAGGCAGCATGGAATAGAGATACGCATTGCCAGAATCTTTAACACATATGGACCACGCATGAATATTGATGACGGGCGTGTGGTTAGCAACTTTATTGCTCAAGCAATTCGTGGTGAACCCCTTACTGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTTTGTCTCTGATATGGTTGATGGCCTTATACGTCTCATGGAAGGGGAGAACACTGGTCCAATCAACATTGGGAACCCAGCTGTGGAGATAAAGATGGTGGAGAATACTCCGGATGATCCTCGGCAAAGAAAACCAGACATTACAAAAGCAAAGGAATTGTTGGGATGGGAACCAAAGGTCAAGTTGAGGGATGGTCTTCCTCTTATGGAAGAGGATTTCCGTCTGAGGCTTGGAGTGCTTACAATGGCAACCGATTCTTCTAATGGACACCACCAATCAACAACAAAGCCACCTCCCTCGCCATCTCCCTTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGGTTACCGGAGGAGCTGGGTTCATTGGGTCTCACCTGGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCCAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTTTGTTGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCGTCTCCTATTTTCTACAAATACAATCCAGTAAAGACAATAAAAACAAATGTGATCGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTCGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTTTATGGTGATCCTCTTGTGCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGCGTTCGAAGCTGCTATGATGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGGATTGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTTAGCAACTTCATTGCTCAAGCACTTCGTGGTGAACCCTTGACAGTCCAATCTCCAGGAACACAAACGCGAAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGATGGTCCACACACTGGACCAATCAACCTTGGAAACCCTGGTGAATTTACAATGACTGAACTTGCTGAGACAGTGAAAGAGCTTATCAATCCAAAAGTGGAGATCAAGGCAGTAGAGAACACTCCTGATGATCCAAGACAGAGAAAACCAGACATTAGAAAAGCAAAGGAATTGTTGGGATGGGAACCAAAGGTCAAGTTGAGGGATGGTCTTCCTCTTATGGAAGAGGATTTCCGTCTGAGGCTTGGAGTTAACAAAACCAGTTAA 4389 0.445 MKVMMRLNMALPPLWRDCLSSAFRTALACTIVGGITLYGPPSIRNLISFPAFSYVALILIIINDATLGDTLRGCWLALYATIQSIGPAMLSLWVIGPTRFTKGTTALAVALAAFVVVLPSGQLVAKRISLGQIVLLYVVGYAKGSETDPLMHPIRLAASTALGVLACVLALLLPYPRLACYQVNQNYKLLTSNILKRLKLLVKVISEEDKTCALGLITRAKSLATTRTKLLSVIMRYQDGMQWERFPIKFFRPHSMTLGERLQEVDTNLRGMELALSSTNSFPINTLDEDLKHGLNRLEEHVSLTIKNAKHGLLGGSLTVPESNAKTITHFLQSLHTIPTTRQELPIYFFLFCAKLLHKKSSTEPTQDKPVQKSGKFPEGKEKWANWATSIRMTNLMPAIKFSFSLGLAIFMGLLYSKENGFWAGLPVAVSYVSGREATFRAANVKAQGTVIGTVYGVVGCFVFERFMPIRFFSLLPWFIFASFLQRSRMYGPAGGISAVIGAVLILGRKNFGPPSEFAIARIIETFIGLLCSIFVDLIFRPKRASACAKIELSQCLATLGESIESLTLHAVPGKTNLEDNQKRLKMQVNELRKFVVEAEVEPNFWFLPFHSGFYNKLLASLSRMVDLLHFGACALNVLQQEFQSGEASGKEDVNMLQGEVGDIKELICSSIKSLEEICRMKSLGFVEKELEKKKISYDIESGKSRECKTCMVSGLGEDGIGETVGSFLQLSRDAVDKLYGDEGEKEVKSEVVLSLSALGFCLSACMQGTVEIEEAIRELVQWENPSKVSTMATNSSNGEQQTSKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCFVSDMVDGLIRLMEGENTGPINIGNPAVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVLTMATDSSNGHHQSTTKPPPSPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMDGPHTGPINLGNPGEFTMTELAETVKELINPKVEIKAVENTPDDPRQRKPDIRKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVNKTS. 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09083 1462 Pfam Fusaric acid resistance protein-like 408 536 - -
Seca4g09083 1462 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 818 1109 IPR036291 -
Seca4g09083 1462 CDD UGD_SDR_e 1149 1453 - -
Seca4g09083 1462 Pfam GDP-mannose 4,6 dehydratase 1152 1446 IPR016040 -
Seca4g09083 1462 Pfam GDP-mannose 4,6 dehydratase 826 1059 IPR016040 -
Seca4g09083 1462 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1133 1457 IPR044516 GO:0042732|GO:0048040|GO:0070403
Seca4g09083 1462 FunFam UDP-glucuronic acid decarboxylase 6 1148 1457 - -
Seca4g09083 1462 FunFam UDP-glucuronic acid decarboxylase 6 822 1113 - -
Seca4g09083 1462 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1144 1453 IPR036291 -
Seca4g09083 1462 Coils Coil 575 595 - -
Seca4g09083 1462 CDD UGD_SDR_e 823 1109 - -
Seca4g09083 1462 MobiDBLite consensus disorder prediction 790 810 - -
Seca4g09083 1462 Gene3D - 1148 1455 - -
Seca4g09083 1462 Gene3D - 822 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09083 Seca-Chr4 215796968 215819485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g09083 1146 1445 Miscellaneous Gene Families AT1G02000 24.776 1.14e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09083 - - gmx:100785658 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09083 4 215796968 215819485 Seca4g09083 4 215796968 215819485 ECH