Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g09011 ATGTCAGGTGGTTTCTTTCGAGGTACTTCTGCTGATCAAGACACTCGGTTTTCCAACAAGCAAGCGAAGCTGCTGAAATCGCAGAAGTTCGCGCCGGAATTGGACCATCTAGTGAATATGACAAAGGTGAACATGGAAGTAATAAAGCCATGGATTACGAGAAGGGTGACTGAGCTTCTTGGCTTTGAAGATGAAGTGCTTATTAACTTCATACACGGTCTTCTGGATGCGAAGGAAGTGAATGGGAAAGAAGTTCAGATACAGATTACTGGTTTTATGGAAAAGAACACCGGAAAGTTCATGAAAGAGCTTTGGACGCTGCTTCTCAGTGCCCAGAAAAATGCCAGCGGTGTTCCTCAGCAGTTCTTGGATGCAAAAGAAGAAGAAATCAGAAAGAAGAAGGTTGAAAATGATAGGATAACAAGTGAAATTCAGAGGAAAAAAGATAAGGAAGATAGAGAGAACATGCAAGAGAGGTTGAAGAAATTGGACGGTGGATTTGATGTGAAGAATACTGATACTGCTTCAGATCCAACCTTGAAGCTAAGTGATTCAGCCAACTACATTCAGGATGGGAAAGAGTCTGACAAGAGGAATGGTGCTAGAACAACAAGCAGGTTATTTTATATTGGAAAACTATATATGGTGTTTACTATCATTGGCAGACGCTCACCTTCAAGGTCATTGAGTAAATCATTTTCAAATTCCCGAAGTTATTCAAGGAATTTGTCATGTTGTACAAATGAATTTTTGTTATTTAGTGGTAGACACAGATCAAGAAGCATATCTGGGTCACCAGAAGCTCGAGGACGCTCCTTTTCTTCTGAAAGGATCCGCCGCTGTTCGCCACAAAGACGATCTATTTCTCCTCCCCCTCGTAGATATTCGCCTAGGCGATCTCCTCTTCACAGGGGATTAACTTATTCAAGGCGAAGATCCAGATCTCGCTCAAATTATAGATCACCATCTCCTGTGCGACGGAGGATGCTTTCTCCATTTCATCGCAGCTCACCTTCTTTTCGCCGACGCAGAACACCCTCTCCTATAAGAAGGCGTGGATCACCTTCTCCAGTTCGTCGTCATAGATCACCATCACCTGTAAGACGGCGAAGGTCACCTTCTCCTTGGAGACGGAGATCTCCCGTCATGAGACGTCGGTCACCTTCACCCGTACGCCGTGGGCCTCCTATACATGTACGACGTAGATCACGTTCCCCCTCACAATCCCCTTCTCCGATATTGCGAAGGTATGGGAATAGAACTCAAAGAAACAGGTCTTTATCTCCTTTGCAGCGTAGATCACCTGTTTCTGGGAATAAGAGATTGCCAAGTTCCTCTCCACGTAGATCTCATTCGCCTGAAGAACGGAGTTCTCAATCCCCAGTAAGGCATGTATCTCCATCACCAGTTAGGAGAAATTCTCCAAGACGCCGAAGAACTCCTGTGCAGTCTTCTAGGGGGAGAGTCAGGTACAGTGTGAGACTGAAATGTTTGTTAAAATCGTGGGCATACCTATATTGCAGAATGCAAGAAAGATTATCACCTGAAGCTCATCAGCCCTCTAGTCCTTTGCGGTCTGTACAGAGAGACAAGAATAGGAACTCTTCACACTATAAATTACAAGATTCAATATCCATGCCCGAAAAGTCTCCGATTCAATCAGTATCTCCACAAGCACGGAATAGGACTGGCAGTCCTCGGAAGCAAAGGGGAGAGAAGCTGATCAGTGAAAGGGGAGAGAAGCTGATCAGTGAAAGAAGCTTGAGTCCAAACGAGAAACCAGGAACCCGAAAACCTAGTCAATACAGCACAGAGGCAAATGAAGAAGTAAAAGAAACATATTATTCTAGAGAGAGCAGGGATTCTAAATCAAATTCATCACGAAACAAATCAAAGTATTCACCCCCTGTTAGGAAGAGAAATGATTCGCCTGCGAAATTTCATCATGAAGAAGAATGCTCTCCTGAAAGGACAGCTGGTCATCTGGATTCTGAATATCGTGGTTATGATGATAACATTGACAGGAACAAGAAAGATCGGGAGATTAAAAGTTATAAATCTTCTGGAAAGGGGGATGAAACAACAGCTCAACAGAAGTCACCAGTGAATAAAGAACTGTTTTCCAGTAAGAAGGCTCATAAATCATGTGCTGTAGATATTAAAACATCTGTCAACAAGGTTCATTCCCATTCAAATCATGACAAGGATAATAATCGGCACCGCAAATTAGACACAACTCAAAATAAAGTTGGAAAAGTTGATAGCATCAATCAGAGTGCTTCAAATGATTCTAGTTCTGAGGAAGGTGACAAACATAGAAGGGAAGGAAAGGATAGGAGAAAGCATAGAAGATCTGATAGAAAATCTGTAACTTCTGATGAAGATTACAGTTATGATTCTGAGTTAGAGGACAGGAAAGAAGCTAAGAGGAGGAAAAAGGAGGAGAGGAAGTTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAAGAGAGAAGACGTAGAAGGGAAGATCGACATGCTGAGAAGCTGAAAATGAAGAGTAAAACAGATGATTATATTTCAGATGTCAAAGAAGCTGAAAGAATTGAGCCTCATCAACGAGATAATGAAGATGCAGTGTCTGAGCAGAAGAAGCTGGAAATTGAGTTGCGGAATAAGGCTCTGGAATCCCTTAAAGCAAAAAGGGGCATGAATCACTAA 2697 0.4279 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVNMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHGLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEEIRKKKVENDRITSEIQRKKDKEDRENMQERLKKLDGGFDVKNTDTASDPTLKLSDSANYIQDGKESDKRNGARTTSRLFYIGKLYMVFTIIGRRSPSRSLSKSFSNSRSYSRNLSCCTNEFLLFSGRHRSRSISGSPEARGRSFSSERIRRCSPQRRSISPPPRRYSPRRSPLHRGLTYSRRRSRSRSNYRSPSPVRRRMLSPFHRSSPSFRRRRTPSPIRRRGSPSPVRRHRSPSPVRRRRSPSPWRRRSPVMRRRSPSPVRRGPPIHVRRRSRSPSQSPSPILRRYGNRTQRNRSLSPLQRRSPVSGNKRLPSSSPRRSHSPEERSSQSPVRHVSPSPVRRNSPRRRRTPVQSSRGRVRYSVRLKCLLKSWAYLYCRMQERLSPEAHQPSSPLRSVQRDKNRNSSHYKLQDSISMPEKSPIQSVSPQARNRTGSPRKQRGEKLISERGEKLISERSLSPNEKPGTRKPSQYSTEANEEVKETYYSRESRDSKSNSSRNKSKYSPPVRKRNDSPAKFHHEEECSPERTAGHLDSEYRGYDDNIDRNKKDREIKSYKSSGKGDETTAQQKSPVNKELFSSKKAHKSCAVDIKTSVNKVHSHSNHDKDNNRHRKLDTTQNKVGKVDSINQSASNDSSSEEGDKHRREGKDRRKHRRSDRKSVTSDEDYSYDSELEDRKEAKRRKKEERKLRKEEKRRRREERRRRREDRHAEKLKMKSKTDDYISDVKEAERIEPHQRDNEDAVSEQKKLEIELRNKALESLKAKRGMNH. 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g09011 898 MobiDBLite consensus disorder prediction 858 877 - -
Seca4g09011 898 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 404 - -
Seca4g09011 898 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Seca4g09011 898 MobiDBLite consensus disorder prediction 726 748 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 515 853 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 689 705 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 635 688 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 515 529 - -
Seca4g09011 898 Coils Coil 868 888 - -
Seca4g09011 898 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Seca4g09011 898 Pfam PWI domain 46 115 IPR002483 GO:0006397
Seca4g09011 898 MobiDBLite consensus disorder prediction 589 609 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 833 853 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 538 564 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 172 189 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 816 832 - -
Seca4g09011 898 Coils Coil 798 838 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 470 484 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 610 627 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 565 587 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 297 317 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 337 386 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 170 199 - -
Seca4g09011 898 Coils Coil 123 150 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 258 487 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 749 764 - -
Seca4g09011 898 MobiDBLite consensus disorder prediction 402 446 - -
Seca4g09011 898 Gene3D PWI domain 33 125 - -
Seca4g09011 898 SMART pwi_2 40 114 IPR002483 GO:0006397
Seca4g09011 898 MobiDBLite consensus disorder prediction 787 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g09011 Seca-Chr4 214804068 214810419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g09011 K13171 - gmx:100810238 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g09011 4 214804068 214810419 Seca4g09011 4 214804068 214810419 ECH