Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08888 ATGTTGTATCTTCAATTATTGACAAATTCATCCATGTTACAGATGCTATCTTCTCTTAGAAAGATCATGTCTTTGCCAGATGATACAAGTATATACTGTGGACATGAGTACACATTGAGTAATGCAAAGTTTGCATTGTCTGTTGAACCTGAAAACAAGGAACTTCAATCCTATGCTGCCCATGTAGCTTACCTTCGAAGTAAAGGTTTTCCCACAATACCAACCTCACTGAAGATGGAAAAGGCTTGTAATCCATTTCTTCGAACATCAAGTGCACAAATCCGGCAATCATTAAAGATTGCAGCCACAGCAGATGATGCAGAAGCCCTGGGTATAATCCGGCAAGCAAAGGATAATTTTTAG 363 0.3884 MLYLQLLTNSSMLQMLSSLRKIMSLPDDTSIYCGHEYTLSNAKFALSVEPENKELQSYAAHVAYLRSKGFPTIPTSLKMEKACNPFLRTSSAQIRQSLKIAATADDAEALGIIRQAKDNF. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08888 120 SUPERFAMILY Metallo-hydrolase/oxidoreductase 10 120 IPR036866 -
Seca4g08888 120 Pfam Hydroxyacylglutathione hydrolase C-terminus 36 120 IPR032282 -
Seca4g08888 120 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 11 120 - -
Seca4g08888 120 Gene3D - 4 120 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08888 Seca-Chr4 212116285 212117300 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08888 K01069 - gmx:100816314 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08888 4 212116285 212117300 Seca4g08888 4 212116285 212117300 ECH