Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08886 ATGGCGAATCTGGTTCCTGGGGTGCTTTTGAAGCTGTTGCAGCATATGAACACGGATGTGAAAGTTGGAGGGGAACATAGGTCATCACTATTGCAAGTTGTGAGTATTGTTCCTGCACTTGCTGGTGGGGAACTTTTCCCAAATCAAGGTTTTTATCTTAAGGTTTCAGATTCGTCTCATGCTACCTATGTGTCTCTCCCTGATGAACATGATGATCTCATTCTCAGTGATAAGATTCAGTTGGGTCAGTTTGTTTTTGTGGATCGCCTTGAGGCTGCTTCACCTGTTCCTATTCTTCGTGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTTGGAACCCCTGAAGACATTGTTGCTACTCATTCATTAGCCTTTCTTGACAACAATAACAGCAACAATGTTTCTGTTTCTTCTGTTAGTCCTAGGAAAGGGTTTGGTAATCATCATCCATTTGTTGTTGGGGATAAGGAGAAGGAGAAGAAGGAGAGAGTGAGATCAAGTGGTGGTGTGAGTGGTAAAGAAGAAGCATTGGATAAGAAAAGTGGTGTTTTGGGTAAAAAATCTCTGCCTCAACCAACAAAGCCAGCACTCAAGATTGAGGTGAAGAGGGAATCGTTTTCAAGATTGAAGTCCATGAATTCGAGGTCCATTCCTTCATCGCCGAGTAGTTGCTATTCATTGCCTACCTCATTTGAGAAATTTGCCAATGGGGTCAAGCAGCAGCAGGCAAAGGTTACTGCTAAGGGAGTGGATAAGCTCACTGCAAAGGTGGGAGTGGTGGAGACAGGAAGGGTTAGTCCTGCTGGGAAGAAAATTGCAGTAGGGAAGGGAAATCCAATCAGAAATTTGGTACAGGGCATTGAGCTTGGGGCTAAGGCTCTCCGAAAGAGCTGGGAAGGGACTATGGAGGTCAAGACTCCCAAAATCAGGACTTCTACCAAGCTTGATCCTAAGCCTGAAGTTCGTAGCTCTACTCCTAGGAGAAGCATTTCTAGTGAAAAGTTGCCACCTAAAGAGGTCCAAGCAACAACAAAGCTCTCTAAAGAAGAGCATAAGACTCAAACATCTATAAAGAAGGCTACTGCTAATGGAACTATGGAGGAACAAGAAAAGTCAAGTAAGCCAAGAACTTCCTTTGGAAAGAAATCAGCAGAAGTTTCTAACAACGGACTCCCTGGAAATTTGGTCAAAGTTTCTTTAAGTAGTAGAAAAGTGACAGATACAAGTGTTCAATGGGCTTCACTCCCGTCTTCTATTTCAAAGCTTGGAAGGGAAGTAATGAAGCATAGAGATGCAGCACAGATGGCAGCAACAGAGGCTATGCAAGAGGCTGCTGCAGCAGAGAGTTTGCTGCAATGTCTAAGTATGTATTCGGAGCTAACTAGTTCTGCTAAGGAACATAACCCACAACCAGCAGTAGAGCAGTTTTTAACTCTTCATGCTAGCCTCAACAGTACCCGGACAATTGCTGAATCCTTAACTAAACCCATTCCAGATGGTTCATCTCCAGATTATGAAAAGAGCAAAGTGGAAGAAGCCCTAAAAGTAAAATCAGAGAGACAAAAACATGCTGCTTCCTGGGTCCAGGCAGGCTTGGTCACCAATCTTTCATCCTTTGCAGTTTATACAAAAGAACCTCAGTCATCCAAGCTTCCAGCTTCAAGTAATTCTCAAAATCAAAAGACTGTTGTGGGAAGTCAACCCATGTTAGTACTACACAATTCAAGTGGAGATGCTTCATCAAAAGTTCATGGAAAAACTCGTCTGACAGCTAATTCCAAGCATGCCTCACAAGGAAGTCATCGCAAACCAGGTGACGGATTAGCTAATGGGCACAAGCAACTAGTCCAACCGCCCCCAGATTGGGTTAGAGGAAATGGCCTCAATGAGGTGGTTAATATGGCTGAAATGTTGCAGTCACAGTCGCGAGACTGGTTTTTGGGATTTGTTGAGAGATTCTTGGACACTGATGGAGACACTACTACCTTGTCAGATAATGGCCAAATAGCAGGTATGCTTACTCAACTAAAGAGTGTAAATGATTGGTTAGATGAGATAGGGTCAAGCAAGGATGAAGGAGAATCATGCCAGATATCAGCAGAGACAATTGACCGGTTGAGGAAGAAGATATATGAATATCTTCTTACACACGTTGAATCTGCTGCTGCTGCACTCAGTGGTGGATCACAACCTTCAACTCAGATCCAAACAACACAGATTAAAGCTAAAAGGTGA 2238 0.437 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILRGVRPVPGRHPCVGTPEDIVATHSLAFLDNNNSNNVSVSSVSPRKGFGNHHPFVVGDKEKEKKERVRSSGGVSGKEEALDKKSGVLGKKSLPQPTKPALKIEVKRESFSRLKSMNSRSIPSSPSSCYSLPTSFEKFANGVKQQQAKVTAKGVDKLTAKVGVVETGRVSPAGKKIAVGKGNPIRNLVQGIELGAKALRKSWEGTMEVKTPKIRTSTKLDPKPEVRSSTPRRSISSEKLPPKEVQATTKLSKEEHKTQTSIKKATANGTMEEQEKSSKPRTSFGKKSAEVSNNGLPGNLVKVSLSSRKVTDTSVQWASLPSSISKLGREVMKHRDAAQMAATEAMQEAAAAESLLQCLSMYSELTSSAKEHNPQPAVEQFLTLHASLNSTRTIAESLTKPIPDGSSPDYEKSKVEEALKVKSERQKHAASWVQAGLVTNLSSFAVYTKEPQSSKLPASSNSQNQKTVVGSQPMLVLHNSSGDASSKVHGKTRLTANSKHASQGSHRKPGDGLANGHKQLVQPPPDWVRGNGLNEVVNMAEMLQSQSRDWFLGFVERFLDTDGDTTTLSDNGQIAGMLTQLKSVNDWLDEIGSSKDEGESCQISAETIDRLRKKIYEYLLTHVESAAAALSGGSQPSTQIQTTQIKAKR. 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08886 745 MobiDBLite consensus disorder prediction 305 324 - -
Seca4g08886 745 Pfam Plant protein of unknown function (DUF936) 4 726 IPR010341 -
Seca4g08886 745 MobiDBLite consensus disorder prediction 305 395 - -
Seca4g08886 745 PANTHER EXPRESSED PROTEIN 1 727 IPR010341 -
Seca4g08886 745 MobiDBLite consensus disorder prediction 150 183 - -
Seca4g08886 745 MobiDBLite consensus disorder prediction 591 623 - -
Seca4g08886 745 MobiDBLite consensus disorder prediction 138 193 - -
Seca4g08886 745 MobiDBLite consensus disorder prediction 380 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08886 Seca-Chr4 211971464 211976871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08886 - - gmx:100817734 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03662 4 63366084 63370129 Seca4g08886 4 211971464 211976871 PCT