Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08885 ATGGTCACAGCCAACAGCACCAATGGCTTAGTATCTATTATAGTGATTGTAGTGTTGATTTTACCAGAAATTGCAGCACAAGCTATCTCACCATCACCCAGTGATTCTGCTGCAGAAATTGTGTCAGAACCTATTAGACAGCAGGATAATACTGTTAGAGTGGATCCTTTAGATAATTTCAAAAAATACAGAGGAGGATTTAACATCACCAACAAGCATTATTGGAGTTCGTTGATCTTCACTGGAGTATATGGATATGCAATTGGGCTACTTTGCCTTTTGTGTGGAATAGTATATGGAAGTTATTTGGTAATAACCAAGTTTTATCACAAAAATGATGGAGGAAGAAGAATGAAGAAGGTCTTTCCTTGTAATTACAAGAGTTGTGATCTTTCACTAGTTCCTTTGGCTATATTGCTCATGATATTAGCTATAGCTGCAACTGGGCTAGTTCTTGGGGGGAGTGCAAGATTCCATTCTGAAGCAAAATCTTCAGTTAACATTATAATCAAGACAGCAAATGAGGCATCAGAAACACTGCACAACACAACAGGAGCATTGAAAGACATGGAAAGTAACTTGATGGAAGCCAATGTCAATGCTGAGACTTCTGTGAATCTTGACTCTACAACTGAGAGACTTGATGATGCATCTGAAAATATTGAAAAGCAAGCTAGAAAGAATAGGCGCCTTATTAACAAAGGCTTGAAAATAGTGTTTGTAACTACCACAGTGATTATATGCTTGAACTTGCTTGCTGTAACAGCTTTGTCAGTTTCTGGAGTCCTGAGGTTACAGAGGCCACTATACCTGCTTGTTGTACTTTGCTGGTTGATGACAGTGATATGCTGGCTATTATTTGGAGTCTATTTCTTTTTACAAAAGTAA 888 0.3795 MVTANSTNGLVSIIVIVVLILPEIAAQAISPSPSDSAAEIVSEPIRQQDNTVRVDPLDNFKKYRGGFNITNKHYWSSLIFTGVYGYAIGLLCLLCGIVYGSYLVITKFYHKNDGGRRMKKVFPCNYKSCDLSLVPLAILLMILAIAATGLVLGGSARFHSEAKSSVNIIIKTANEASETLHNTTGALKDMESNLMEANVNAETSVNLDSTTERLDDASENIEKQARKNRRLINKGLKIVFVTTTVIICLNLLAVTALSVSGVLRLQRPLYLLVVLCWLMTVICWLLFGVYFFLQK. 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08885 295 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 27 294 IPR040283 -
Seca4g08885 295 Coils Coil 200 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08885 Seca-Chr4 211934017 211938648 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08885 - - gmx:100811143 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03655 4 63216526 63222068 Seca4g08885 4 211934017 211938648 PCT