Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08878 ATGGCGAACCCATCTGGGAACCATCAAGACACTCATGGTGTATCGTCTTCGTTCAACGGTAATTCAGCTCCCGAAACTTCTTCAGGTGCTGCTATATCCATGAACATGAAGCACAACCCTGGAATATCCCTCGATTGGACCGCAGAAGAGCAAACCATTCTCGAAGATGGACTCTCCAAGTATTCCTCAGAATCTAACATAGTACGCTACGCAAAGATAGCCCTACAGTTACAGAATAAGACGGTCCGGGATGTAGCACTGCGAGTCAGGTGGATGAATAAGAAAGAGAATAGCAAGAGAAGGAAGGATGATCATAATTTAACACGGAAAAGTAAAGATAAAAAGGAAAGGGTTTCTGATCCTGCAAAGTCATCTCATTTTGCTGCTCGGTCAAATGTCCCCCCATATGCTCCGCCAATGATTACAATGGACAATGATGATGGCATCTCTTATACAGCAATTGGAGGTCCCACCGGTGATCTATTAGAGCAAAACACACAGGCCTTGAATCAAATCTCCAAAAATCTTTCTTCTTTCCAGGTGATTGACATTTTTAACTGA 561 0.4332 MANPSGNHQDTHGVSSSFNGNSAPETSSGAAISMNMKHNPGISLDWTAEEQTILEDGLSKYSSESNIVRYAKIALQLQNKTVRDVALRVRWMNKKENSKRRKDDHNLTRKSKDKKERVSDPAKSSHFAARSNVPPYAPPMITMDNDDGISYTAIGGPTGDLLEQNTQALNQISKNLSSFQVIDIFN. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08878 186 MobiDBLite consensus disorder prediction 96 141 - -
Seca4g08878 186 MobiDBLite consensus disorder prediction 96 123 - -
Seca4g08878 186 SUPERFAMILY Homeodomain-like 34 99 IPR009057 -
Seca4g08878 186 CDD SANT 46 95 IPR001005 -
Seca4g08878 186 MobiDBLite consensus disorder prediction 1 34 - -
Seca4g08878 186 Gene3D - 45 95 - -
Seca4g08878 186 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 19 180 - -
Seca4g08878 186 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08878 Seca-Chr4 211820369 211827933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08878 - - gmx:100801419 298.516