Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08815 ATGAGATATGGAGGACTTTACCATATGTTTTATCAATACAATCCTAAAGGTGCTGTTTGGGGCAATATTGTCTGGGCCCACTCTGTATCAAAGGATCTTGTGAATTGGACCCCATTAGATCCTGCCATCTTCCCTTCTCAGCCTTCTGATATCAATGGCTGCTGGTCAGGCTCAGCCACAATGCTTCCTGGGGGAAAGCCAGCCATTTTATACACAGGAATTGATCCCATGAATCACCAAGTTCAAAACTTGGCCATCCCCAAAAACATGTCTGACCCATTACTTAGGGAATGGACTAAGTCACCCAAAAATCCATTAATGGCACCTACTATTGCTAACAAGATAAATTCAAGCTCATTTAGAGACCCTACTACTGCTTGGGTAGGCAAAGATGGGTACTGGAGGGTGCTAATTGGAAGCAAAAGAGACACTAGGGGAATGGCAATTTTGTACAAGAGCAAAAACTTTGTTAATTGGGTTCAAGCCAAACACCCCCTACATTCAGCCAAAGGCACTGGAATGTGGGAGTGCCCTGATTTCTACCCTGTATTGAATAAGACCCCATTTACCATTGGCATGGACACATCTGTGAATGATGATGGTGTTAGGCATGTGCTCAAGGTTAGCTTGGATGATACAAAACATGATCACTATTTGATTGGGACTTATAACTCTGCCAAGGATATCTTCATTCCTGATACTGGATTTGAGGATAATAAATTTGTCTTGAGATATGATTATGGCAAATATTATGCCTCAAAAACTTTTTTTGATGATGGAAAGAACAGAAGGATCTTAATGGGTTGGGTTAATGAATCCTCAAGTGTTGCAGATGACATCAAGAAAGGATGGTCTGGAATCCATACTATTCCAAGGGCTATCTGGCTTCATAAATCAGGAAAACAGTTGGTGCAATGGCCGGTGGAGGAAGTTGAAAGCCTACGTGTGAACCCAGTCAACTGGCCAGCCAAAGTGGTCAAAGGAGGTGAACTGCATCAAGTTACTGGTATTAATGCAGTACAGGCTGATGTTGAAGTTTCATTTGAAGTGAAAGATTTTGGAGGGGCCGAAGTATTGGACCATTGGATAGATCCCCAAATTTTGTGTAGTGGAAAGGGTGCAGCCGTAAAAGGTGGTCTGGGACCATTTGGTCTGCTAGTTTTTGCTTCTCAAGGCTTGCAAGAATACACAGCAGTATTTTTCAGAATATTTAGATACCAACATAAAAATTTAGTCCTCATGTGTAGTGACCAAAGCAGGTCCTCCTTGAATAAAGATAATGATATGACCACTTATGGGACTTTTGTGGATGTGGACCCACTTCATGAGAAGCTGTCACTAAGAACTTTGATTGATCACTCAGTAGTTGAGAGTTTTGGGGGAGAAGGAAGGGCTTGCATCACAGCCAGAGTTTATCCCACATTAGCAATCAATGATAAGGCAAGGGTATACGCTTTCAATAATGGAACAACCGCTGTCAAGATCACAAGATTGAGTGCTTGGAGTATGAAGAAAGCAAAAGTCAACTGA 1530 0.4196 MRYGGLYHMFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSATMLPGGKPAILYTGIDPMNHQVQNLAIPKNMSDPLLREWTKSPKNPLMAPTIANKINSSSFRDPTTAWVGKDGYWRVLIGSKRDTRGMAILYKSKNFVNWVQAKHPLHSAKGTGMWECPDFYPVLNKTPFTIGMDTSVNDDGVRHVLKVSLDDTKHDHYLIGTYNSAKDIFIPDTGFEDNKFVLRYDYGKYYASKTFFDDGKNRRILMGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLVQWPVEEVESLRVNPVNWPAKVVKGGELHQVTGINAVQADVEVSFEVKDFGGAEVLDHWIDPQILCSGKGAAVKGGLGPFGLLVFASQGLQEYTAVFFRIFRYQHKNLVLMCSDQSRSSLNKDNDMTTYGTFVDVDPLHEKLSLRTLIDHSVVESFGGEGRACITARVYPTLAINDKARVYAFNNGTTAVKITRLSAWSMKKAKVN. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08815 509 Gene3D - 318 503 - -
Seca4g08815 509 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 319 503 - -
Seca4g08815 509 SUPERFAMILY Concanavalin A-like lectins/glucanases 307 505 IPR013320 -
Seca4g08815 509 Gene3D Glycosyl hydrolase domain; family 43 1 317 IPR023296 -
Seca4g08815 509 CDD GH32_Fruct1-like 1 296 - -
Seca4g08815 509 Pfam Glycosyl hydrolases family 32 C terminal 310 502 IPR013189 -
Seca4g08815 509 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 1 319 - -
Seca4g08815 509 SUPERFAMILY Arabinanase/levansucrase/invertase 2 308 IPR023296 -
Seca4g08815 509 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 508 - -
Seca4g08815 509 Pfam Glycosyl hydrolases family 32 N-terminal domain 2 307 IPR013148 -
Seca4g08815 509 SMART glyco_32 1 463 IPR001362 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08815 Seca-Chr4 210479283 210483338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08815 1 509 Glycoside Hydrolase AT3G13790 63.514 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08815 K01193 - gmx:100776791 941.799