Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08783 ATGGACTTCTTAGCTAGCTCTATGAGATCGAGCTTGACGGTTGGTGAGACGCTGTGTGCAGTGTTCATTCCGTTGATAGGAGCAGTAGAAGCTTTCATTTTCAGCTTAACCAGTTGCTTCCATCACCATGGTCCCAAGAAGAAGAACATCCCTACTCAATTCGAGGATATTGTCCGTCTCGCTAGCGATTCTCCATTTACTGTTAATGAAATCGAGGCATTGCACGAATTGTTCCAGAGGCTGAGTAATTCCATCATTGATGATGGCCTGATACACAAGGATGAGCTCAGATTGGCACTAATGCAAAACCCAGCTGGCGAGAATCTCTTCCTTGATCGGGTAAATTCATTTTCAACAATTGTTATTTTTTTATTTTCTTGA 381 0.4252 MDFLASSMRSSLTVGETLCAVFIPLIGAVEAFIFSLTSCFHHHGPKKKNIPTQFEDIVRLASDSPFTVNEIEALHELFQRLSNSIIDDGLIHKDELRLALMQNPAGENLFLDRVNSFSTIVIFLFS. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08783 126 PANTHER CALCINEURIN B 38 114 IPR045198 GO:0005509|GO:0019722|GO:0019900
Seca4g08783 126 SUPERFAMILY EF-hand 61 110 IPR011992 -
Seca4g08783 126 Gene3D - 57 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08783 Seca-Chr4 209380255 209382574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08783 6 114 EF-hand Containing Proteins AT4G33000 57.798 2.21e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08783 K06268 - gmx:100801943 149.058