Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08771 ATGGCTGGGATTGTAGTGATTTTTGACTTTGACTCAACAATCATCGAGTGTGATAGTGATAATTGGGTACTTGATGAGTTTGGTTTAACTGAGAAGTTCTATCAGCTTCTTCCTAGCATGCCTTGGAACCCTCTCATGGATAGGATGATGAATGAACTTCATTCACAAGGAAAAACCATTGAAGACATTGTAGAAGTTCTGAACAGGACTCCAATGCATCCCCGCATTGTCCCAGCTATTGAGACAGCTTATTCCCTTGGGTGTAAGCTGAAAATTGTGAGTGATGCAAATATTTTCTTTATTGAAACAATTTTGAAGCATCATGGGGTGTGGAATTGTTTCTCAGAGATTACTGCAAACCCCAGTTATGTTAATGGAGAAGGGAGGCTCACAATTTGCCCCTACCATGATTATCTAAAGTCTTCTCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGCAATTTCACTAACTCCTATATATAACCTATTTTCTCCCTCTAACGATATTCAGGGATTGGTCATAGAAAGGATCCAAAATTCCCTTGATGCTGTGGGAAAGAAGAAATTCATCTATCTTGGAGATGGAAGTGGAGACTTTTGCCCTAGTTTGAAGCTCAAAAACTGTGATTATTTGATGCCAAGAATGAACTTTCCATTGTGTGATTTAGTATCTAAAAACTCCAACGACATAAAGGCAGAGGTACATGCCTGGAAAGATGGGGAAGAGCTTGAGCATGTTCTGCGCCAAATTATTATCAACAAAGCTAATAGTGAAGGAAACAGCATTGGTAGTTCTACTCCAACAATCTCACTTGATTGCAAGTTGGGGACAATTCCAATTGATGCTCATAAACCTTTCCCTAAAGCGCTTCCAGTTCCTCATTAA 891 0.3962 MAGIVVIFDFDSTIIECDSDNWVLDEFGLTEKFYQLLPSMPWNPLMDRMMNELHSQGKTIEDIVEVLNRTPMHPRIVPAIETAYSLGCKLKIVSDANIFFIETILKHHGVWNCFSEITANPSYVNGEGRLTICPYHDYLKSSHGCNLCPPNMCKAISLTPIYNLFSPSNDIQGLVIERIQNSLDAVGKKKFIYLGDGSGDFCPSLKLKNCDYLMPRMNFPLCDLVSKNSNDIKAEVHAWKDGEELEHVLRQIIINKANSEGNSIGSSTPTISLDCKLGTIPIDAHKPFPKALPVPH. 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08771 296 SUPERFAMILY HAD-like 5 204 IPR036412 -
Seca4g08771 296 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 256 IPR016965 GO:0016791
Seca4g08771 296 PIRSF PLP_phosphatas_PHOSPHO2 1 257 IPR016965 GO:0016791
Seca4g08771 296 Gene3D - 2 211 IPR023214 -
Seca4g08771 296 NCBIfam MtnX-like HAD-IB family phosphatase 4 216 IPR006384 GO:0016791
Seca4g08771 296 Pfam Putative Phosphatase 166 253 IPR016965 GO:0016791
Seca4g08771 296 Pfam Putative Phosphatase 4 158 IPR016965 GO:0016791
Seca4g08771 296 NCBIfam HAD-IB family phosphatase 5 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08771 Seca-Chr4 209188439 209190500 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08771 K13248 - gmx:100785357 470.7