Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08768 ATGGCTGGAATTGTGGCTGTTTTTGACTTTGACAAGACCATCGTCGACCTGGACAGTGATAACTGGGTTGTTGACGAGTTGGGTTTCACTCATTTGTTCAATAAGCTGCAACCCACCATGCCGTTTAACTCTCTTATGGATAGGATGATGATGGAGCTTCATTCTCATGGGAAAACCATTGAGGACATTGTCCAAGTTTTGCAGAGGATTCCTATACATCCTAGAATAATCCCTGCTATTAAAGCAGCCAATGCTTTGGGGTGTGATTTGAGGATTGTAAGCGATGCGAACACATTCTTCATCGAGACAATTCTAAAGCACTTCGGAATAAGGGAATGTTTCTCAGAGATTAACACTAACCCGGGTTACTTTAATGAAGAAGGAAGATTAAAAATTTTGCCCTACCATGACTTTAATAAGTCTCCCCACTTATGTAATTTGTGTCCTCCAAACATGTGCAAGGGTCTAATCATAAAGAAAATCCAAGACTCAATATCCCGTGTGGAAAACAAGAGATTTATCTATCTTGGGGATGGTAGTGGGGATTACTGTCCAAGCTTGAAGCTTAGTGATCGAGACTTTGTGATGCCAAGGAAGAACTTTCCTGTATGGGACTTGATATGCAAAGAACCTTCACTAATGAAAGCTGAAATCCATGAATGGAGTGATGGGGAAGAGTTTGAACGAGTTTTGCTAAAGCTAATCAACAAAATTTCAATAGAGGAAAGTGCTCAGTTCATTTCAGCTGATTGCAAGCTCCAGACTCTATCAGTCTCTGCTCATGAGGCTCTCCCTCAAGTTCTCCCACTTCCACAATATTAA 822 0.41 MAGIVAVFDFDKTIVDLDSDNWVVDELGFTHLFNKLQPTMPFNSLMDRMMMELHSHGKTIEDIVQVLQRIPIHPRIIPAIKAANALGCDLRIVSDANTFFIETILKHFGIRECFSEINTNPGYFNEEGRLKILPYHDFNKSPHLCNLCPPNMCKGLIIKKIQDSISRVENKRFIYLGDGSGDYCPSLKLSDRDFVMPRKNFPVWDLICKEPSLMKAEIHEWSDGEEFERVLLKLINKISIEESAQFISADCKLQTLSVSAHEALPQVLPLPQY. 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08768 273 NCBIfam MtnX-like HAD-IB family phosphatase 4 199 IPR006384 GO:0016791
Seca4g08768 273 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Seca4g08768 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 243 IPR016965 GO:0016791
Seca4g08768 273 SUPERFAMILY HAD-like 5 199 IPR036412 -
Seca4g08768 273 Gene3D - 3 200 IPR023214 -
Seca4g08768 273 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Seca4g08768 273 NCBIfam HAD-IB family phosphatase 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08768 Seca-Chr4 209090081 209091778 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08768 K13248 - gmx:100785878 449.899