Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08756 ATGGGTAGTCCGGGAGAGAACGGAATCGATGCGTCGGTTGGTGGGTTGGTGTGGGTCCGGCGTCGTAACGGGTCGTGGTGGCCTGGCCAGATAATGGGTCTTCACGAAGTGTCGGAGGATTGCTTGGTTTCCCCGAGATCGGGTACTCCTGTTAAGCTCTTGGGTAGAGAGGACGCAAGCGTGGATTGGTACAATCTTGAAAAATCAAAGCGGGTTAAGGCTTTTCGTTGTGGGGAGTATGATGGATGCATAGAAAAGGCGAAGGTGTCTGCTGCCAATTCGAACAAGAAGGCAGTGAAGTATGCTCGCAGGGAAGATGCTATTCTTCATGCTCTTGAGCTGGAGAGTGCTCGCCTTGGCAAGGAGCCGTTAAACTTCTGCTCCAGATCAGATAAATTAGGTAGTGAATGTGGTGGTTCAGCTGGAGAATCACCGGTCATGTCTCGTTCTGGTGATGACAATGAGGATGTGATTGATGATCTGAGTGACCCTGAAGACAATTCTAATTCAGCTCTGGAAATGTCTCAATCGGGTATAGCTTTAGGAGAGGCAAATCAAAATGGTTCTTCCAAGATGCAATCTATGCAGGGAAGGAGAAGAAGAACACCTAATGATTCAGAAGATGATGGAACTGAAGGAGTCAAGCGAATGAGAGGGCTTGAGGATTTGGGCATTGCTGTAGCGTCAAAGAGAAAGGTACAGGGTGCTGTTACACCTGAGATAGTTCAGCAAGGTGGTACTTTACTCAGCAATTCAAACACAGGGAACTGCCTGGCAAATGGAACTTCTGTTAATGGTGGGAAGGGTCACACTACCACATTGAAACGAAAGAGATCACAAGTGGCAAATGTTCATGAATTCTTGAAAAGGAAAAATCGACGCCGTCCATTGACTAAGGTTTTGGAGAGTACAGCCATGGTGTCACTTCCGGTAGTTTGTGATCAGCTTCCTAGTTCAAGCAGTTCTCCATTATGTGGGGTGACTAATGGCAACGCTTCAGGATTAGATTCTAATGGATCAAAGAAAAGTTCCCCATCGGCAATTCCTAATTCTGACAGCACTCAGGCTGCTTGTGAAAATGGAACTTCAGTAAATATTCAGGACCATGGTTGTGATGCTTCTCAAATCAGTCACACAGTAAAGGAGAATGACGCTTCTGGCATATCAGGGCTAATTAGGAATGATTCTTGCAATAAATTATTTGATGTGCCATTTGCCAGGGTTCTAGGGGAGGAGAAACAAGCCACAGGTCTCTCACCCGTACTCGCTCTTTGTTCATCTGGAAAGCCTCAAGTGGGTGCATTGGGACAGCAATCCTGTCATCTTAGTCCATCTGAAGCTCTGTCATTGAGAAACGAGGGTCAGAATACTGATTGTACAAATTCAGCTGCTGGTCAGAATATTATTAACCATAGAATAGAGAAAGGTAGTTCAAAATGGCAGTTAAAAGGAAAGAGGAATTCAAGACATACAAGTAAAAATAGAAAAGAAGTCTCAAGAAAACATATGGACATGGATGATGCATCCAATGCTTATTTGGCAGGTATGGAGAACTCCAACGGATTCTCTCAGGGTGCTGGTCAGAAAGTTGATTGGAATAACATAGGTGCCCCCAATGCTTCATACAATTGTACCTCTCAAGCTAGGTGCAAACCATTTGCCGAAGGCCTACTAGGTGGGTTTCTGGATTTGAGCACGCATGTTAGGGGGACAACAGAGGTGAAGCTATTGCCTGATGGATCTCTCATACCTCAGAGATCACTTCCCTACCGTCAGTCTCGTTTTACTGTTAACTCCAGATATCAGATGGTAGATTTTCCTGGAAGAAATTATTGTTCCGATGCTTCATTATATGATGTTAAGCTAGAAGTTAAATCCAGCTACCGGCCACAACATGTCCCTTTGGTTTCTCTTGTGAGTAAACTGAATGGCAAAGCCTTCATTGGACACCCTCTAACAGTTGAGGTTTTGGAAGATGGTTATTGTGATAGAATGTTGAGTGGCATTGGATGTGACTTGGAAGGTGGTGACACTTTCACTTATGGTGTGGTAAAGCCGAACTCAGTAAGTGGAAGAATACGTTCCAAGAATTTATCGCGTTTTTCACCTAGAAAATCTTCCAAGATGAAGAAATCTGGTCTATCAAATAAAAAGATTCGGAAACTGTCCTCACTGACTGGGCATAAGCAATCAGAAAAGGAGAGGAAACCAGCGGTAGGTAAGTTCAAGGGTCCTTTCATAGCTTGTATTCCCCTTAAAGTAGTATTCAGTAGGATAAATGAAGCAGTAAGCGGTCAGGCACGACCGACACACCGTGCATTACCAACATCCAACCCTTGA 2340 0.4449 MGSPGENGIDASVGGLVWVRRRNGSWWPGQIMGLHEVSEDCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDGCIEKAKVSAANSNKKAVKYARREDAILHALELESARLGKEPLNFCSRSDKLGSECGGSAGESPVMSRSGDDNEDVIDDLSDPEDNSNSALEMSQSGIALGEANQNGSSKMQSMQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIAVASKRKVQGAVTPEIVQQGGTLLSNSNTGNCLANGTSVNGGKGHTTTLKRKRSQVANVHEFLKRKNRRRPLTKVLESTAMVSLPVVCDQLPSSSSSPLCGVTNGNASGLDSNGSKKSSPSAIPNSDSTQAACENGTSVNIQDHGCDASQISHTVKENDASGISGLIRNDSCNKLFDVPFARVLGEEKQATGLSPVLALCSSGKPQVGALGQQSCHLSPSEALSLRNEGQNTDCTNSAAGQNIINHRIEKGSSKWQLKGKRNSRHTSKNRKEVSRKHMDMDDASNAYLAGMENSNGFSQGAGQKVDWNNIGAPNASYNCTSQARCKPFAEGLLGGFLDLSTHVRGTTEVKLLPDGSLIPQRSLPYRQSRFTVNSRYQMVDFPGRNYCSDASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLTVEVLEDGYCDRMLSGIGCDLEGGDTFTYGVVKPNSVSGRIRSKNLSRFSPRKSSKMKKSGLSNKKIRKLSSLTGHKQSEKERKPAVGKFKGPFIACIPLKVVFSRINEAVSGQARPTHRALPTSNP. 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08756 779 Gene3D - 5 117 - -
Seca4g08756 779 MobiDBLite consensus disorder prediction 332 356 - -
Seca4g08756 779 PANTHER T17B22.17 PROTEIN-RELATED 5 777 IPR044679 -
Seca4g08756 779 MobiDBLite consensus disorder prediction 164 197 - -
Seca4g08756 779 MobiDBLite consensus disorder prediction 198 215 - -
Seca4g08756 779 Pfam PWWP domain 15 104 IPR000313 -
Seca4g08756 779 CDD PWWP 14 105 - -
Seca4g08756 779 MobiDBLite consensus disorder prediction 700 737 - -
Seca4g08756 779 MobiDBLite consensus disorder prediction 482 496 - -
Seca4g08756 779 ProSiteProfiles PWWP domain profile. 13 68 IPR000313 -
Seca4g08756 779 MobiDBLite consensus disorder prediction 700 717 - -
Seca4g08756 779 MobiDBLite consensus disorder prediction 478 504 - -
Seca4g08756 779 SUPERFAMILY Tudor/PWWP/MBT 11 116 - -
Seca4g08756 779 MobiDBLite consensus disorder prediction 135 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08756 Seca-Chr4 208440051 208444510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08756 - - gmx:100791879 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08756 4 208440051 208444510 Seca4g08756 4 208440051 208444510 ECH