Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08715 ATGGCGTTCAAGAAAGATAAAGATCAATATGCAAAATATACAATTACATCTCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAGCCAGATCTTGGGATACCTCTGGACCTTCTTGATCTCAGTGTTTACAATCCTCCCAGTGCCAGGCCACCTCTCGACCCGGAAGATGAAGAATTGCTGCGAGATGTTGAAGCTGTTACTCCTATAAAAAATGATGGCATAAAAAGAAAAGAAAGGCCTACTGATAAAGGCGTTGCTTGGCTTGTCAAAACACAATATATATCTCCTCTGAGCATGGATTCAACAAAACAGTCCTTAACTGAAAAACAAGCAAAGGAACTGAGAGAGATGAAGGGAGGCCTCAACATTTTGGAAAACCGTAACAATAGGGAAAGACAAATCAAGGAAATAGAAGCATCATTTGAAGCAGCTAAATCACGCCTTGTTCATGCAACTAAGAAAAATTTGCGTCCTGTTGAGGTTCTGCCTTTGTTGCCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCAGCATTTGATAATGCTCCTACAGTTGATTCAGAAATGTATTCTAAGTTGGACAAATCTGTTCGTGATGTCCATGAATCAAGGGCACTCATGAAAAGCTACGTTGCATCAGGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCATACATGGTCCCAGCATCTGGAGAGCTGTCAAAGGATATATACGATGAAAATGAAGAAATCTCGTATTCTTGGGTTCGCGAGTACCATTGGGATGTTCGGGGTGATGATGCTGATGACCCTACAACATACGTAGTGTCGTTTGATGAGTCAGAGGCACGCTATTTGCCTCTTCCAACAAAACTTGTTTTAAGAAAAAAGAGAGCTAAAGAGGGAAGATCTGGTGATGAGGTTGAACAGTTTCCAATACCTTCAAAAGTGGTTGTAAGGCAGAGGCCAAATGTTGCTGCAATTGAGCTGAAGGAGTCTGGGGTTTATACAAATACAAAGGGTAGTTCTTCACACAGAGGGGGTTTAGAGATCGATGATGACATGGAAGAGCAACATAGAGTTGCACCGGACCAGGATAATTATCAGTCTAGTGGAGCAGAAGATGACATGTCTGATTGA 1128 0.4131 MAFKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSARPPLDPEDEELLRDVEAVTPIKNDGIKRKERPTDKGVAWLVKTQYISPLSMDSTKQSLTEKQAKELREMKGGLNILENRNNRERQIKEIEASFEAAKSRLVHATKKNLRPVEVLPLLPDFDRYDDQFVVAAFDNAPTVDSEMYSKLDKSVRDVHESRALMKSYVASGSDPANPEKFLAYMVPASGELSKDIYDENEEISYSWVREYHWDVRGDDADDPTTYVVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQFPIPSKVVVRQRPNVAAIELKESGVYTNTKGSSSHRGGLEIDDDMEEQHRVAPDQDNYQSSGAEDDMSD. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08715 375 MobiDBLite consensus disorder prediction 329 375 - -
Seca4g08715 375 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 1 375 IPR007133 GO:0006368|GO:0016570|GO:0016593
Seca4g08715 375 MobiDBLite consensus disorder prediction 342 359 - -
Seca4g08715 375 Pfam Paf1 3 356 IPR007133 GO:0006368|GO:0016570|GO:0016593
Seca4g08715 375 MobiDBLite consensus disorder prediction 360 375 - -
Seca4g08715 375 Coils Coil 128 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08715 Seca-Chr4 207580085 207584985 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08715 K15174 - gmx:100800148 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08715 4 207580085 207584985 Seca4g08715 4 207580085 207584985 ECH