Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08686 ATGCCACCTCTCTCTCTCCCTCTTCATGCAATACACAGTTACACTTCACTTCTATTCCAATTCCCAAACTCCAAGTTTTCGCATTGCAAAATCTGTGGAATTAGGTATTCTGTATTTGAAAAGAAAAAAATGGAATCGAGTCGAAGAGCTGTGGAATCATACCGGTGGTCACGTTTGATCGATTCAGCTACATCCGATGAAGATAAAATCACTCCAGTCTACAAACTCGAAGAAATCTGTGAACTCCTCCGTTCTTCTCATCCTACTATCGTCAAGGAACTCTCTGACTTCATCCTTAAACGCCTCGACCACAAGAGTCCCATCGTTAAACACAAGGCTCTGAGATTGATCAAATACGCGGTTGGGAAGTCCGGTGTGGAGTTCAGAAGGGAAATGCAGAGACATTCTGTGGCGTTTCGTCAGTTTGTTCACTATAAAGGACAATTGGATCCTCTGAAAGGCGATGCACTCAACAAAGCCGTTCGAGACACCGCTCATGAAGCTATCTCTGCCATTTTTTCTGAAGATAACAACAATAAGCCATCACCTGCTGCTGATAATCTCAGCCAGAGGATTCAAGGGTTTGGGAACACAAACTTTCAACCACAGCCACAAGATAAGAAATCTTTCCTCAGTGAGGTAGTTGGTCTTGGAAGTGCATCCATTAAGCAAGGATTTAATACCTTGACACGTGGACATTCTTCATTCTTCAAGAATGAAACTACTGGAAATGGAACCTACAACTACAAGAGTCCTAATCTTCATACCTCATTCACTGCAGAAACAGAACATTGTGACAGATATGAACCGGTTGTGTATCGTGGTGAAATTCAAAGCACTAGTTCTGGTTCTGGTCTTCGGAATCAAGCTTCAAAAGCAACTAAGGTAGAAATATCAAATGGGGATTCAGATGCAAGTTATCTGGAGAGTAAGACACGAGAGGATAGGTTGCTAGAGACAGTGGTAACTTCTGGAGGTGTACGCCTACAACCCACTCGAGATGCCATTCAAGTTTTTCTCACAGAGGCTGCAAAGTTGGATGCCCTGGCTTTATGTCATGCCATTGAACGAAAACTCCAATCTCCAATGTGGCAGGCACGTTTGTTAAGTTTGATATTTCTGCAAAAATATGAATCAATTCATACATGTTCTTGGTCTTTTAGGTGGAGGCCAATTAAGCAGCTATGCTATTCAGAGGAGGCTGTGAAGGAAGACAGTGCTACTGTTGCTGAGTTGCCTGACTTGATAGACACTGGTGATTCAAAGGATTATCATGGAACAGGTGATACTGCAAAGAATACAAATGACCAAAATACAGCAAATTTGACACCATTGACACCTTTGGCTCTGGTTGATGATTTACTTGGAAATTTTATTGACTCTGGTGAAGCTAGTAATGAACTGAAAAGTGATGACCCCTTTGCTGATGTATTATTTCATTCAAGTGAGAATAAAGAGCATGCAGATGATGTCTTTTCAGGGATGACTGTGGGTAACAATAAACAGGGTTGTCCCGTGAATCATGGTCCAGGGAATAGAAGTGAACCTGAAATTGACATTTTTGCCTCAAATTCCAGGAATGGAAATCATAAAGAGTTTGTTGATGATTCATTGGCTGGCTTGACCATTGAAGGAAATACCTCAAGTACAAAGCAGAAAGCAACATCTCCTGCCACGCAATCTGAATCTTTATTTTCTGGTTTAAATAATCACATTGGCCATTTGGGCCCTGACAATGCTTTAGGTGGCATGTTGAGCTCTCAAACAGTTGGGCTCAATGTAAATATGTTTCCTTCAGGTCATCTACCTTATACTGTGCAGCCTGGTATTATGTTGAACCAATCATATTCATCTCAGCCACTTAATTATGGTGCCATGGGAAATGTCTTAGCTCAGCAGCAATTTCTGGCAACAATGGCTAATTTCCATCACCTTAATAATGTCAACAAGCAAACTGATAGTAATGCTGAAATTGCGGGACCCAGTGGAAGAACACCTCTTCCGGACATATTCCAATCAAAATTTCCTTCTCAAACTCCTAGCTTAATGATTAACAGTTCAAAGAAAGAAGAAACTAAAGCATTTGATTTTATCTCAGACCATCTTTCTGCTGCGTATGATACTAGGAGAGTGATTTGA 2139 0.4109 MPPLSLPLHAIHSYTSLLFQFPNSKFSHCKICGIRYSVFEKKKMESSRRAVESYRWSRLIDSATSDEDKITPVYKLEEICELLRSSHPTIVKELSDFILKRLDHKSPIVKHKALRLIKYAVGKSGVEFRREMQRHSVAFRQFVHYKGQLDPLKGDALNKAVRDTAHEAISAIFSEDNNNKPSPAADNLSQRIQGFGNTNFQPQPQDKKSFLSEVVGLGSASIKQGFNTLTRGHSSFFKNETTGNGTYNYKSPNLHTSFTAETEHCDRYEPVVYRGEIQSTSSGSGLRNQASKATKVEISNGDSDASYLESKTREDRLLETVVTSGGVRLQPTRDAIQVFLTEAAKLDALALCHAIERKLQSPMWQARLLSLIFLQKYESIHTCSWSFRWRPIKQLCYSEEAVKEDSATVAELPDLIDTGDSKDYHGTGDTAKNTNDQNTANLTPLTPLALVDDLLGNFIDSGEASNELKSDDPFADVLFHSSENKEHADDVFSGMTVGNNKQGCPVNHGPGNRSEPEIDIFASNSRNGNHKEFVDDSLAGLTIEGNTSSTKQKATSPATQSESLFSGLNNHIGHLGPDNALGGMLSSQTVGLNVNMFPSGHLPYTVQPGIMLNQSYSSQPLNYGAMGNVLAQQQFLATMANFHHLNNVNKQTDSNAEIAGPSGRTPLPDIFQSKFPSQTPSLMINSSKKEETKAFDFISDHLSAAYDTRRVI. 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08686 712 ProSiteProfiles VHS domain profile. 63 144 IPR002014 GO:0035091|GO:0043130
Seca4g08686 712 CDD ENTH_like_Tepsin 58 175 IPR035802 -
Seca4g08686 712 Gene3D - 45 184 IPR008942 -
Seca4g08686 712 PANTHER UNCHARACTERIZED 49 702 IPR039273 -
Seca4g08686 712 SMART VHS_2 56 192 IPR002014 GO:0035091|GO:0043130
Seca4g08686 712 MobiDBLite consensus disorder prediction 175 205 - -
Seca4g08686 712 MobiDBLite consensus disorder prediction 420 441 - -
Seca4g08686 712 Pfam ENTH domain 59 172 IPR013809 -
Seca4g08686 712 SUPERFAMILY ENTH/VHS domain 57 173 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08686 Seca-Chr4 206734692 206739399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08686 - - ccaj:109807931 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08686 4 206734692 206739399 Seca4g08686 4 206734692 206739399 ECH