Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08655 ATGGCTTCTCTGGCAAGCTTAGCTGCAATTCAACCGGCTTCTGTCAAGGGCCTTGCTGGCAGTTCCCTTACCGGAACTAAGCTCACTTTCAAGTCCTCTCACCAGAGTTTCAGATCCAAGAATTTCAGGAGTGGCGCTGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATCTGGGCAACACTACTGGTCAGTGGGACTTGTATGGCTCAGATGCACCCTCACCCTACAATCCTCTTCAGAGCAAGTTCTTCGAGACATTTGCTGCTCCATTCACAAAGAGGGGATTGTTGCTCAAGTTTTTGATCCTGGGAGGTGGTTCCACCCTCGCATACTTGAGTGCCACCGCTTCAGGTGATGTTCTACCAATCAAGAAAGGTCCACAACTTCCACCAAAGCTCGGTCCCCGTGGCAAGATCTAA 435 0.4966 MASLASLAAIQPASVKGLAGSSLTGTKLTFKSSHQSFRSKNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSATASGDVLPIKKGPQLPPKLGPRGKI. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08655 144 Gene3D - 98 120 - -
Seca4g08655 144 Pfam Photosystem I reaction centre subunit VI 8 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Seca4g08655 144 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 1 144 IPR004928 GO:0009522|GO:0009538|GO:0015979
Seca4g08655 144 FunFam Photosystem I reaction center subunit VI 98 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08655 Seca-Chr4 205984456 205986561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08655 K02695 - gmx:100499832 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08655 4 205984456 205986561 Seca4g08655 4 205984456 205986561 ECH