Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08653 ATGGAATCTATTGGCGTCCTTATGACTTGCCCAATGTACAGTTACCTCGAAGAAGAGCTCGCAAAGCGCTTCAACCTCTTAAAACTCTGGAACTATTCCTCATTCAACGCTTTCGCCAAGACACACGCTAATTCAGTTCGCGCAGTAGTTGGAAACGCCAAAATTGGAGCCGACGCCAACACCATTGATTCCTTGCCCAAACTGGAGATTGTCTCGAGTTACAGCGTCGGATTGGACAAGATTGACCTCGATAAATGCAGAGACAGAGGGATTCGAGTCACCAACACGCCGGACGTGTTGACCGACGACGTCGCCGATATCGCCGTCGGCCTTGCCTTGGCCGTCCTCCGGAAGATTTGTCAGAGCGATAGATTTCTCAGAAATGGGCTTTGGAAAAATTCTGATTTTCAATTGACTACAAAGTTTAGTGGGAAAGCAATTGGAATTGCTGGTTTGGGAAGGATTGGGTCGGCAATTGCAAAGAGAGTTGAAGCTTTTGGGTGCCCAGTTAGTTACTACTCCAGATCTGAAAAACCAGAGACAGGATATAGGTACTACCCTAACATCCTTGACTTGGCGGCAAACTCTCAAATACTTGTTATAGCATGTGCCCTTACTGAAGAGACCCGTCACATAGTGAATCGTAAAGTTATTGATGCATTGGGCCCAAAAGGGATTATAATCAATATTGGGCGAGGCCAGCACATCGACCAACCCGAACTTGTAGCTGCACTGACTGAAGGACGACTAGCTGGAGCAGGCCTTGATGTGTATGAGAATGAGCCAGAGGTGTCTGAACAACTATTTGGTCTTGAGAATGTTGTTCTCACTCCTCATGTGGGGAGTGACACTGTGGAAACTTGCAAGGCAATGGCAGACCTTGTAATTGCAAACTTAGAGGCACATTTCCTTGGCAAACCACTTTTGACTCCAGTGATTTGA 942 0.4671 MESIGVLMTCPMYSYLEEELAKRFNLLKLWNYSSFNAFAKTHANSVRAVVGNAKIGADANTIDSLPKLEIVSSYSVGLDKIDLDKCRDRGIRVTNTPDVLTDDVADIAVGLALAVLRKICQSDRFLRNGLWKNSDFQLTTKFSGKAIGIAGLGRIGSAIAKRVEAFGCPVSYYSRSEKPETGYRYYPNILDLAANSQILVIACALTEETRHIVNRKVIDALGPKGIIINIGRGQHIDQPELVAALTEGRLAGAGLDVYENEPEVSEQLFGLENVVLTPHVGSDTVETCKAMADLVIANLEAHFLGKPLLTPVI. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08653 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 4 308 - -
Seca4g08653 313 FunFam Putative 2-hydroxyacid dehydrogenase 101 284 - -
Seca4g08653 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 136 - -
Seca4g08653 313 Gene3D - 101 284 - -
Seca4g08653 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 30 312 IPR006139 GO:0016616|GO:0051287
Seca4g08653 313 CDD HPPR 4 303 - -
Seca4g08653 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
Seca4g08653 313 Gene3D - 17 307 - -
Seca4g08653 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08653 Seca-Chr4 205955513 205958349 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08653 - K18606 pcin:129289839 504.982