Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08623 ATGCCATTTTCAAAAGCTGCTCGCTACGCCTACACCCGTCTCCTATGCCAACACCGTCGTCAGGATCAAAACCGTGTCATAACTGTCGTTTTATCCCACCGTTTTCAAGTCACCTGCACGGTGGGCCTCCTACTATTCCTCACCACGGGGTACATTTTTTGGCCGTCCGGTCCTGACCTTAAGATCGTGCGGCTGAAGCTGAAGCGGGTCAAGGTCCATCCTTTGCCGCGCATCACCGTAGACATCTCCATGCTCCTCACGCTGAGGGTGCATAATGCTGACGTGTACTCCATGGACTTCGGAGCGGTTGACGTGGCGGTCTCCTACAGGGGGAAGGAGCTGGGGCACGTGACCTCGGAACATGGGCACGTGAGGGCTAGGGGATCCTCTTATGTGAACGCTGAGGTGGAATTTGCCGGGATCAGTTTGCTGTCTGAGATGGTGTTGCTGCTGGAGGACCTGGCCAAGGGTGCGGTACCCTTTGATACTGTTAGCCAGGTTAGGGGCCGATTGGGGCTTCTCTTCTTTCACTTCCCTATGAAGGTAGCAAAACTATCGTGTGAGGTTTTGGTCAGTACATTAAACCAGACAATTGTTCGTCAACATTGTCTCCACGAGTGA 621 0.5362 MPFSKAARYAYTRLLCQHRRQDQNRVITVVLSHRFQVTCTVGLLLFLTTGYIFWPSGPDLKIVRLKLKRVKVHPLPRITVDISMLLTLRVHNADVYSMDFGAVDVAVSYRGKELGHVTSEHGHVRARGSSYVNAEVEFAGISLLSEMVLLLEDLAKGAVPFDTVSQVRGRLGLLFFHFPMKVAKLSCEVLVSTLNQTIVRQHCLHE. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08623 206 SUPERFAMILY LEA14-like 42 160 - -
Seca4g08623 206 Gene3D - 56 187 - -
Seca4g08623 206 Pfam Late embryogenesis abundant protein 87 182 IPR004864 -
Seca4g08623 206 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 39 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08623 Seca-Chr4 205496754 205501721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08623 - - cam:101505811 281.567