Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08607 ATGTTCTATGGTGCGGCGGTATGGGACCCATGGCTTATTGTTTCTCAAATTGTTTGCTTCCAATGCTTGTACTACATCACTCTCGGCTTCTTCTTGGCCATTCTTGTTGGAACTCGTGTATCTAGAATGAGCCTCGTTTATTTCTTCGATTTTGTTACCATCACTACTTCCACCTTCACCGGTTGGTGTGTCATTGCTTCATTTCTCCTCACCTCCGTTGCAGGGGCAGTGTATATGCTTTATTTGATTGAAAGGTTAAAGAAGTGCTTGGATTTTTCAGCCACTCTCTACATCGTTCATCTTTTTATATGCATTGTTTATGGTGGTTGGCCCTCCTCTATTACTTGGTGGATTGTGAATGTTACTGGCTTTGCAGTGATGGTTCTGCTAGGTGAATATCTGTGTAGGAAGCGTGAACTTCAGGAGATACCTACACGTTATCGATCAAGTGTGTTTGATTGGCATAGGTAA 471 0.4246 MFYGAAVWDPWLIVSQIVCFQCLYYITLGFFLAILVGTRVSRMSLVYFFDFVTITTSTFTGWCVIASFLLTSVAGAVYMLYLIERLKKCLDFSATLYIVHLFICIVYGGWPSSITWWIVNVTGFAVMVLLGEYLCRKRELQEIPTRYRSSVFDWHR. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08607 156 Pfam Integral membrane protein S linking to the trans Golgi network 4 144 IPR019185 -
Seca4g08607 156 PANTHER SYS1 1 147 IPR019185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08607 Seca-Chr4 205113355 205115517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08607 K20318 - tcc:18595890 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08607 4 205113355 205115517 Seca4g08607 4 205113355 205115517 ECH