Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08597 ATGGCTACTAGTGCGGGTGAAGAAGATGTTGAGTATGATAGTGATCCTGAGGAGGCGAAGAGATCTCTGGCAATGCGGAGGAGGCGCGAGGCCAGTGATGATGAAGAAGGTGAAGATGAAGGGAGAGACAAAAGTGCAGATCATCGCCGGCTCATTCATTCCGATGAATCCGACGGCGAGGGTGGAGTTGCCGATTATGATGAAGAAGAGGAATTGGAAGAAGAAGAAGATGTAGTTGAAGAAGAGGAAGAAGATGTAGTAGTTGAAGAAGAGGAGGAGGAAGAGGTGGGCGAGGAGAGGGATAGGGAGGAAGGAGGTGCAAATGGGTCAGTAGTTATGGTAAAGGATTCTGATGCTGATGCTGATGTGAAACCCAATTTGGAAGAAGAATCAGGGAACAGGGATGATGAAGAGAAGAAGGAGAGTGAACCATTTTCGGTGCCCACTGCTGGAGCATTTTACATGCACGATGACCGTTTCAGGGATAATGCTGGTGCCCGCCACAGGCGGATGAGGGGTGGAAGGAGACTGTGGGAGTCCAAAGATGACAGGAAATGGGGACATGATAAGTTTGAGGAAATTACCTTGCAGGAAAGGCACTACAAAGAGGGAAGGAGACCTTCTAAGGGTAATTATCGGGGCCGTGGTAAGACTCGTGGCGTTGTTCGCGGGGGATATGTTCAAGGTAACAGAAAAGGATATGATGACAGAGGCAATCAGACTCAGGTACCAAGGGGTGTTGTGCGAGGGAGAGGGCCACGGAGGTATGAGCCTACCAATAAAAACAATGATTCAGCACCCCAGATGCACAATAAACAATCTGGGAAGCCTCTTGACAACAAAACTTCAAATGTTAGTTCAGGGAAAACTTCCACACCCATTTCTAATTCAGAATCTGATCCTGTGCCAACTAAGAAACAAGTGTTTGGATCAAACTTGAATTATGCCTCTCCCCCATTTTACCCTTCGGGCTCTTCTAACAAAGACATAAACCTGACATCAAAAAGAGATGTCCAGACTGGCAGCACAAGCAGGAATGTTCACACCGGTGTTATGGATGAGGGTTTTTTAGCTCAACAAAACAATGCATTGCTTCGAGGAAAGAATGTTGTTGATTCTCTCAACATGGACAAGCTGTATATTGATGGGTCTGTCCCTCCATCTGTTGGAAAGCCTTTAAACAATTTGCATATGCATCTGCCTGGATCTTCTGATGCTAATGCTTCTCAATCTACTCATCCAAGGGCTGCTGGGAGGGGTGGAGCAATCCCAGTACAGATGAATTATCAGCCTCTTATCTCACATAATCAAGTAAATAAAGCTGTTCCAACACAACTCCAGGCTATCCAGAGAACTTCTGCTCCAGGGCGAACTTCATTGCAATCCCCTGCTCCACAGTTGGGTCATCGACCTGGTAGTGCACCTCAAGCTTCATCTCCCCCAAAAACTTCTGTGGCAATTAGTTCATTGGATTCTGGAGAAGTTGATGTAGCTTCAGAATTGAGTAAATCCAAGGGTGCGTTGGTTGGGAAGGGAAGGGGAGGTTCCCAGGGTAGTGGAAGAGGTTCTTTTGTTTATGGGGGAGCTATGGGGTCTGCTGGAAATATGGGTGGTAGTCATGGAGATCAGAACTTCCCAGCCTTCTTGCCAGTTATGCAATTTGGAGGACAGCATCCTGGTGGTATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACATGGTTACCAGTTTTGACTGGTGCTGCAGGAGCTTTAGGGGCTACATACTGTCCACCCTATCTCTCTGTTGACGGTGCTTATCATGCTCGACAATCAGGACAGACATCTGCAGCAGCTACTTCAAGCAAGGAAAATGTGAGTAAAGCTAATAATGAATGGAAGCCACCACAGAGACCTGAGCCTGTAAGTGATGAGTTTGGACAGCGGCATAATAAGCCCCGCAGATACTCGGAGATGAATTTTGGGCAATGA 2016 0.4707 MATSAGEEDVEYDSDPEEAKRSLAMRRRREASDDEEGEDEGRDKSADHRRLIHSDESDGEGGVADYDEEEELEEEEDVVEEEEEDVVVEEEEEEEVGEERDREEGGANGSVVMVKDSDADADVKPNLEEESGNRDDEEKKESEPFSVPTAGAFYMHDDRFRDNAGARHRRMRGGRRLWESKDDRKWGHDKFEEITLQERHYKEGRRPSKGNYRGRGKTRGVVRGGYVQGNRKGYDDRGNQTQVPRGVVRGRGPRRYEPTNKNNDSAPQMHNKQSGKPLDNKTSNVSSGKTSTPISNSESDPVPTKKQVFGSNLNYASPPFYPSGSSNKDINLTSKRDVQTGSTSRNVHTGVMDEGFLAQQNNALLRGKNVVDSLNMDKLYIDGSVPPSVGKPLNNLHMHLPGSSDANASQSTHPRAAGRGGAIPVQMNYQPLISHNQVNKAVPTQLQAIQRTSAPGRTSLQSPAPQLGHRPGSAPQASSPPKTSVAISSLDSGEVDVASELSKSKGALVGKGRGGSQGSGRGSFVYGGAMGSAGNMGGSHGDQNFPAFLPVMQFGGQHPGGIGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLTGAAGALGATYCPPYLSVDGAYHARQSGQTSAAATSSKENVSKANNEWKPPQRPEPVSDEFGQRHNKPRRYSEMNFGQ. 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08597 671 MobiDBLite consensus disorder prediction 259 347 - -
Seca4g08597 671 Pfam CASC3/Barentsz eIF4AIII binding 124 217 IPR018545 GO:0003729|GO:0006397|GO:0035145
Seca4g08597 671 MobiDBLite consensus disorder prediction 1 347 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 397 422 - -
Seca4g08597 671 PANTHER PROTEIN MLN51 HOMOLOG 1 671 IPR044796 GO:0003729|GO:0006397|GO:0035145
Seca4g08597 671 MobiDBLite consensus disorder prediction 175 210 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 622 640 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 400 414 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 117 144 - -
Seca4g08597 671 SMART Btz_2 107 218 IPR018545 GO:0003729|GO:0006397|GO:0035145
Seca4g08597 671 MobiDBLite consensus disorder prediction 61 100 - -
Seca4g08597 671 Coils Coil 65 99 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 453 486 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 622 671 - -
Seca4g08597 671 MobiDBLite consensus disorder prediction 15 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08597 Seca-Chr4 204917246 204922880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08597 - - gmx:100779103 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08597 4 204917246 204922880 Seca4g08597 4 204917246 204922880 ECH