Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08596 ATGGAGGAAAGCAACAATAGAGGGGAATTTCAGGCTAATTTAGCTAAACTGTCTACATTAAGGTCAGGTGGAAGTTTTAAATCAACATTATCTGGAAGATCAACTCCGCGAAATTCCCCTTCCTTTCGGAGACTAAATTCTAGCCGAACACCTAGAAGAGAAGGAAGGGGCAGTGTAGGTGGTGGGGCACAGTGGTTTCGGAGCAATCGCTTGCTGTTGTGGTTGCTTCTAATTACCCTCTGGGCTTATCTTGGATTTTTTGTTCAGTCCAGGTGGGCACATAGTGATAAGAAAGAAGAGTTTTCTGGCTTTGGAACTGGGCCAAGAAATACCAACTCAGATGCTGAACAGATTCAGCGCCGTGATTTGCTTGCAAGTGATAATTCCTTGTCTGCTAATAATGAGACAGTTAGAAATGAAGAAGGGATTGGTAAAATAGTGAATGTAGTTTTGGCCAAGAAAGAAAATGATGTTCCATCTCCTCGTAAAACAAGTTCAAAGAAAAGGAGCAGACGATCAAATCGTGCTTCAAAAGGTAAAGCTCGTGGTAAGCGGAATCCAACACTGGAAGTTAAGAACAGTGATATAGAGGAGCAGGAGCCAGAAATTCCTCAAACCAACAGCACATATGGATTGCTTGTTGGTCCATTTGGCTCAATAGAGGATGGGGTTCTGGAATGGAGTCCTCAGAAACGTACTGGGACATGTAACAGGAAGGGGGATTTTGCACGTCTTGTTTGGTCCAGAAGATTTATCTTGATATTCCATGAGCTTTCCATGACCGGAGCTCCACTTTCAATGATGGAGTTGGCAACAGAGCTTTTGAGCTGTGGGGCCACTGTTTCAGCTGTTGTGCTTAGCAAAAAGGGTGGCTTGATGTCAGAGCTTGCTAGGAGACGAATCAAGGTGCTTGAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTCATTGCTGGTTCAGCTGTCTGTGCATCATGGATTGAACAATATATTGAACGTTTTCCTGCTGGTGCAAGCCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAGTACTTTGATCGTTCAAAGGGTGTCTTGGACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCGCAATCTAAACAATGGCAAAAATGGTGTGAAGAAGAGAGCATAAAACTGAGATCCCAACCTGAAATTGTTCCATTGTCTATTAATGATGAACTGGCGTTTGTAGCTGGCATTCCTTCTACACTTAACACTCCATCTTATAGTACTGAGAAAATGATTGAGAAAAGGAAGTTGTTACGAGAATCAGTTCGTAAAGAAATGGGCTTAACTGATAATGATATGCTTGTAGTATCTCTGAGTAGCATCAACCCTGGTAAGGGCCAGCTATTGCTTCTTGAATCAGCAAGCTCAGTAGTAGAACATGGACAGATGCAAGATGATAAGAAAATGAAAAAATTGCCAACTATAAGGGAAGGCCTATCTACCCTGGCTAGAAGAAAGCGTATTAGAAAATTATTACCATTGTTGAAGGATGGCAAAGTAGCTTCAAATGATATCCGAAGCAATTCTTTAAGCAGAAGGAAGCAAGTGTTGCCTAACAACAAAGGAACAATACAACAATCTCTCAAAGTTCTTATTGGTTCTGTTGGATCTAAAAGTAACAAGGTGGATTATGTGAAAGGCCTTCTAAGTTTCCTAGAACAGCATCCAAATACTTCTAAATCAGTTTTGTGGACTCCAGCCACAACACAGGTTGCATCGCTTTACTCTGCTGCAGATGTATATGTTATAAACTCTCAGGGACTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTTCTTGGAACGGATGCTGGGGGAACACAGGAGATAGTAGAGCACAATGTTACAGGCCTTCTTCATCCTGTTGGACGTCCAGGGAATGATGTGCTTGCACAGAATCTCCGGTTTTTACTTAAAAACCAGTTGGTAAGGAAGCAAATGGGGGTGGAAGGAAGAAAGAAGGTGCAGGGGATGTACTTGAAGCAACACATGTATAAGAAATTTGTAGAGGTTATTGTCAGATGCATGAGAAGCAAATAA 2112 0.4205 MEESNNRGEFQANLAKLSTLRSGGSFKSTLSGRSTPRNSPSFRRLNSSRTPRREGRGSVGGGAQWFRSNRLLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTNSDAEQIQRRDLLASDNSLSANNETVRNEEGIGKIVNVVLAKKENDVPSPRKTSSKKRSRRSNRASKGKARGKRNPTLEVKNSDIEEQEPEIPQTNSTYGLLVGPFGSIEDGVLEWSPQKRTGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMSELARRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIEQYIERFPAGASQVAWWIMENRREYFDRSKGVLDRVKMLVFLSESQSKQWQKWCEEESIKLRSQPEIVPLSINDELAFVAGIPSTLNTPSYSTEKMIEKRKLLRESVRKEMGLTDNDMLVVSLSSINPGKGQLLLLESASSVVEHGQMQDDKKMKKLPTIREGLSTLARRKRIRKLLPLLKDGKVASNDIRSNSLSRRKQVLPNNKGTIQQSLKVLIGSVGSKSNKVDYVKGLLSFLEQHPNTSKSVLWTPATTQVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPVGRPGNDVLAQNLRFLLKNQLVRKQMGVEGRKKVQGMYLKQHMYKKFVEVIVRCMRSK. 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08596 703 MobiDBLite consensus disorder prediction 165 182 - -
Seca4g08596 703 MobiDBLite consensus disorder prediction 23 60 - -
Seca4g08596 703 Pfam Glycosyl-transferase family 4 247 416 IPR041693 -
Seca4g08596 703 CDD GT4_PimA-like 252 696 - -
Seca4g08596 703 Pfam Glycosyl transferases group 1 561 677 IPR001296 GO:0016757
Seca4g08596 703 PANTHER BNAA05G14870D PROTEIN 1 703 - -
Seca4g08596 703 MobiDBLite consensus disorder prediction 23 46 - -
Seca4g08596 703 MobiDBLite consensus disorder prediction 154 203 - -
Seca4g08596 703 MobiDBLite consensus disorder prediction 183 199 - -
Seca4g08596 703 Gene3D Glycogen Phosphorylase B; 423 683 - -
Seca4g08596 703 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 257 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08596 Seca-Chr4 204907562 204912869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08596 24 701 Glycosyltransferase AT3G15940 63.280 0.0 831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08596 - - gmx:100795000 1163.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08596 4 204907562 204912869 Seca4g08596 4 204907562 204912869 ECH