Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08590 ATGGAGTTAATTTCAGGTCTACCAGAGGACGTAGCCCGAGACTGTTTGATTCGGGTTTCTTACCAGCAGTTCCCGGCGGTGGCTTCCGTCAGCAAAGGGTGGAAAACGGAGATTCAGATGCCGGAGTTTCGCCGTCGGAGGAGGACCACGGGCCACGCCCAGAAAATCCTCGTCACGGTTCAATCCCGGTTCGATTCGGATAAACGCGCCAGCGGTTTGCTCGTTAAGGCCGTGTCGAACCCGGTTTACCGGCTCAGCGTATTCGAACCGGAAACTGGTAACTGGAGCGAGTTACCGTTACCACCCGAATTCAGTTCCGGGTTGCCCATGTTCTGTCAGATAGCGGGTGTCGGGTACGATCTTGTGGTAATGGGCGGGTGGGACCCAGATTCGTGGAAAGCCTCGAATTCTGTGTTAATCTATGATTTTATGTCAGCCAAGTGGCGCCGTGGGGCCGACATGCCAGGTGGACCCCGTACCTTTTTCGCTTGTGCGTCTGATTCTGATCATACGGTGTACGTGGCAGGGGGGCACGATGAGGAGAAGAACGCGCTAAAGTCAGCGTTTGCGTATGACGTGGCAAGGGACGTGTGGGTCCCAATGCCGGACATGGCTAGGGAGCGCGACGAGTGCAAGGCCGTGTTCCGCCGCGGCAAGCTACGCGTCGTCGGCGGGTACTGCACGGAGATGCAGGGGCGGTTTGAGCGGAGCGCGGAGGAGTTTGATGTTACCACGTGGCAGTGGGGCCCGGTGGAGGAGGAGTTCTTGGATGACGCCGCGTGTCCGAGGACTTGTGTGGACGGTGGTGATGATGCGGAGGAGGGGAGAATGTACATGTGCAGGGGAGGTGACGTGGTGGCATTGCAGGGGAACACGTGGCGAACTGTGGCGAAGGTGACAAGTGAGATACGCAATGTAGCGTGTATGGGAGTGTGGGAAGGGGCATTGTTGCTGATTGGGTCAAGTGGGTTCGGGGAACCGCATATGGGCTTTGTGTTGGATCTGAAGAGCGGTGTTTGGAGTAAACTTGTGAGCCCAGAAAAGTACAGTGGACACGTCCAGTCTGGTTGCCTTTTGGAAATTTAG 1086 0.5681 MELISGLPEDVARDCLIRVSYQQFPAVASVSKGWKTEIQMPEFRRRRRTTGHAQKILVTVQSRFDSDKRASGLLVKAVSNPVYRLSVFEPETGNWSELPLPPEFSSGLPMFCQIAGVGYDLVVMGGWDPDSWKASNSVLIYDFMSAKWRRGADMPGGPRTFFACASDSDHTVYVAGGHDEEKNALKSAFAYDVARDVWVPMPDMARERDECKAVFRRGKLRVVGGYCTEMQGRFERSAEEFDVTTWQWGPVEEEFLDDAACPRTCVDGGDDAEEGRMYMCRGGDVVALQGNTWRTVAKVTSEIRNVACMGVWEGALLLIGSSGFGEPHMGFVLDLKSGVWSKLVSPEKYSGHVQSGCLLEI. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08590 361 Pfam Kelch motif 168 204 IPR006652 GO:0005515
Seca4g08590 361 SUPERFAMILY Kelch motif 79 343 IPR015915 GO:0005515
Seca4g08590 361 Gene3D - 42 353 IPR015915 GO:0005515
Seca4g08590 361 CDD F-box_AtAFR-like 3 47 - -
Seca4g08590 361 PANTHER OS02G0208700 PROTEIN 2 361 IPR044595 GO:0080037|GO:2000762
Seca4g08590 361 SMART kelc_smart 171 218 IPR006652 GO:0005515
Seca4g08590 361 SMART kelc_smart 120 168 IPR006652 GO:0005515
Seca4g08590 361 Pfam Kelch motif 109 159 - -
Seca4g08590 361 Pfam F-box domain 4 41 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08590 Seca-Chr4 204734601 204735686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g08590 7 217 Miscellaneous Gene Families AT4G33900 23.144 1.68e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08590 - - vum:124828606 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08590 4 204734601 204735686 Seca4g08590 4 204734601 204735686 ECH