Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08456 ATGATACTTGCGGTCCTGTTTGCCAACGCGGAGGGTAACATCCTCATCGAACGAACTCAGTGGCTTTATGATTGCAGTTTTCATGGAGTTCCTGCAGAGGAGCGCCTACACTGGCGTTCTTTCTTGGTTAAACTTGGAGCTGATAATCTTAAGGGTGTAAAAAAGGAAGAGCTCCTAGTTGCTTGCCACAAGTCAGTTTCTATTGTATACACAGTGCTTGGAGATGTCAGCATATATGTTGTGGGGAAGGACCAGTATGATGAACTTGCTTTGTCAGAGGTGATCCTAGTGATAACCTCAGCTGTGAAGGATATATGTGGAAAGCCCCCAACTGAGCGCCGTTTCCTTGATAAGTATGGAAGAATTTGCTTGTGTTTGGATGAAATTGTATGGAAGGGATATATGGAAAATACAGAAAAAGACAGAATCAAAAGATTGGTAAGGTTGAAGCCTCCAACTGAGTTCTGA 468 0.4316 MILAVLFANAEGNILIERTQWLYDCSFHGVPAEERLHWRSFLVKLGADNLKGVKKEELLVACHKSVSIVYTVLGDVSIYVVGKDQYDELALSEVILVITSAVKDICGKPPTERRFLDKYGRICLCLDEIVWKGYMENTEKDRIKRLVRLKPPTEF. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08456 155 Gene3D - 1 150 - -
Seca4g08456 155 FunFam SNARE-like superfamily protein 1 150 - -
Seca4g08456 155 SUPERFAMILY SNARE-like 1 151 IPR011012 -
Seca4g08456 155 PANTHER ZETA-COAT PROTEIN 2 150 IPR039652 GO:0006890|GO:0030126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08456 Seca-Chr4 201798080 201802216 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08456 - - tpra:123898761 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08456 4 201798080 201802216 Seca4g08456 4 201798080 201802216 ECH