Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08391 ATGGATTGGTTCTCATGGCTTTCAAAAACTGGCCTTGAGCCATCATTAGTGTATGAGTATGGCCTTACTTTTGCTCACAATGAGCTTGAAGAAGAAGACATGTTATACTTCAATCACGAGTTTCTCCAAAGCATGGGCATCTCCATAGCTAAGCACAGATTAGAAATTCTCAAGCTTGCAAAGAAAGAGAAGGGGAAAAGTCCACGCCCAGTGGCAAGGCTCATGGTGGCAATCAAGAAAACAAAGAGGAGCTTATCTAACTACGTTCGGAATTTGATTCACCATGAAGAATCAGCACTTGTTGTGGTGCCAACAAAGCCTAGTGGTTTGGGAACAAGATGGAAGAGTGCTATGGTGAAGAGGAACAAGAAGTTGGTGGTGGCAAAGCCAGAGAGACTCTTTCTCACAAATGGAAGTCCCAAAGTGATTCCTGCTCTGCCTGGACCTGACCTTGATGGTTATTCTAGTCCTGTGGTGTACCATTTCCAAAAGGAGGAAAAGATGGATGATGGAGATGATGATGGGTATTGGTCAGCTGCTGTTGAAGAGATCAAGTGGGATACCATGTTTCAGGATCTGAAGCCAAACTGA 591 0.4416 MDWFSWLSKTGLEPSLVYEYGLTFAHNELEEEDMLYFNHEFLQSMGISIAKHRLEILKLAKKEKGKSPRPVARLMVAIKKTKRSLSNYVRNLIHHEESALVVVPTKPSGLGTRWKSAMVKRNKKLVVAKPERLFLTNGSPKVIPALPGPDLDGYSSPVVYHFQKEEKMDDGDDDGYWSAAVEEIKWDTMFQDLKPN. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08391 196 SUPERFAMILY SAM/Pointed domain 5 64 IPR013761 -
Seca4g08391 196 CDD SAM_superfamily 2 62 - -
Seca4g08391 196 Gene3D - 1 68 IPR013761 -
Seca4g08391 196 Pfam SAM domain (Sterile alpha motif) 6 58 IPR001660 GO:0005515
Seca4g08391 196 PANTHER OSJNBA0033G05.11 PROTEIN 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08391 Seca-Chr4 199124079 199124669 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08391 - - gmx:102660142 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g08391 4 199124079 199124669 Seca4g08391 4 199124079 199124669 ECH