Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g08310 ATGGCAACTACTGGTGCTGGGGTAATTGGTGGTAATTCATTGTCATGGATGCAATTCAGAGGCAGAGAAAGGAAACACAAGAGGGTTAAGATTTGTTGTTCTTCTTCTCTCATGGATTCTTATAAGACCTTAAGAATCCAACCTGGTGCCTCTCAAACTGAGGTTAAGAAGGCTTTCAGACAGCTTGCTCTGCAGTACCATCCAGATGTGTGCCGAGGAAGCAAATCTGGGGTGCAGTTTCACCAAATCAATGAGGCTTATGATGTGCGTTATCCTCTCTCTACTTCTCTGAATGTTGTGATGGCCAATTTGAGAGGAGAATCCAACGCAACAGAATTGTATGAGGCGTACGATGAAGGCATTGATGAGCAAATGAATGGAGTGAATGATCCAGATTGGGATTTGTGGGAAGAGTGGATGGGATGGGAAGGAGCAGGAATTCGTGATTACTCATCTCATATTAATCCTTACATTTGA 477 0.434 MATTGAGVIGGNSLSWMQFRGRERKHKRVKICCSSSLMDSYKTLRIQPGASQTEVKKAFRQLALQYHPDVCRGSKSGVQFHQINEAYDVRYPLSTSLNVVMANLRGESNATELYEAYDEGIDEQMNGVNDPDWDLWEEWMGWEGAGIRDYSSHINPYI. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g08310 158 ProSiteProfiles dnaJ domain profile. 39 118 IPR001623 -
Seca4g08310 158 PANTHER CO-CHAPERONE PROTEIN DJLA 28 156 - -
Seca4g08310 158 PRINTS DnaJ domain signature 41 59 IPR001623 -
Seca4g08310 158 PRINTS DnaJ domain signature 75 95 IPR001623 -
Seca4g08310 158 PRINTS DnaJ domain signature 59 74 IPR001623 -
Seca4g08310 158 Pfam DnaJ domain 39 89 IPR001623 -
Seca4g08310 158 Gene3D DnaJ domain 17 92 IPR036869 -
Seca4g08310 158 SMART dnaj_3 38 98 IPR001623 -
Seca4g08310 158 SUPERFAMILY Chaperone J-domain 35 89 IPR036869 -
Seca4g08310 158 CDD DnaJ 39 89 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g08310 Seca-Chr4 197498817 197500902 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g08310 - - gmx:100780336 230.72