Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06356 ATGGCTCTCCTCAGAAACCTCCTCTCTCGCCGCCTGCATTCACACCTCAATCCCTTCACCCCTCACACCCTTCATTCCTTCAACATCAAAACCCCACACAGACCCCTCGCATCCTTGCCCCAGACCCAAGACCCAGTTTCCCCAAAACCCCAAACCCAGCATAACAGAAAGCCCCTCAGTGCTCTCTTCACCGAAGCCGTGGAGCTGTCAGGGAAAACCACAACCAGCGACGACGAAAAGGAAGAAAAAGAACAAGGATTGGACGCCGAGCTGAAGAAGAAACTGAGGGAGTTAGCGGATGTGGTGAGGAGCTTCAAGGAAAAGAGACAACCTGAGCGGAAGAGCTTAGATGCTGCGTTTACAAAGCAACCTGCGAGGAACAGCTTATATGCTGTGTTTACCAACCAACCTGCTAGTGTTGTTAGCACGCGAGAGGAAGTGAAACAGAAGGAACCAATGGTCGTTAAGGAGCTTTCAGCTGATATGATGGTGTTTGTGAAGTATTTGTTCGAAAATGGGTATTTTAAGGATGCCAATTTTGCCAAGGGTAAGGAAAGATTTGACCCTGCTTGGTTTGAGAGGTTTTTCGCCAGGGGTTATATAAAGTTTGCGGCACAGAAATTCGCCAGAGATAACCAAGAAATCGCCAAATGGCTATCAGGAAGTGCCTTGAAGCAAGTGGCAGAGTTTGGTTGCCCCTCCACAGACAGGAGTAATGTCTTTACCGCTAAAAGACTGCGGAAATTTTTTGAGGTTCCAGAAAACACGGTTTGCAGTAAATGCACCCTGCGGCAATCATGCAAGTATGAGAATCAAAGTGTGTGGAAATGTGACACCAATAAATTGGACTTGGTGATAGTTATGAAGGTTATTACTTCATATGCTTTAGAGTTAGTGCATCCTCAGCTGGTAGTGTCTGATCAAGTAAACAAGTCAGTTAGTCAATTGCTTAAGGAAGTTGTGAAACTGAGTCAAACCACTTGA 984 0.4624 MALLRNLLSRRLHSHLNPFTPHTLHSFNIKTPHRPLASLPQTQDPVSPKPQTQHNRKPLSALFTEAVELSGKTTTSDDEKEEKEQGLDAELKKKLRELADVVRSFKEKRQPERKSLDAAFTKQPARNSLYAVFTNQPASVVSTREEVKQKEPMVVKELSADMMVFVKYLFENGYFKDANFAKGKERFDPAWFERFFARGYIKFAAQKFARDNQEIAKWLSGSALKQVAEFGCPSTDRSNVFTAKRLRKFFEVPENTVCSKCTLRQSCKYENQSVWKCDTNKLDLVIVMKVITSYALELVHPQLVVSDQVNKSVSQLLKEVVKLSQTT. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06356 327 PANTHER ZINC FINGER PROTEIN 133 325 - -
Seca4g06356 327 MobiDBLite consensus disorder prediction 26 59 - -
Seca4g06356 327 MobiDBLite consensus disorder prediction 35 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06356 Seca-Chr4 125839043 125844362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06356 190 324 EF-hand Containing Proteins AT1G55040 30.714 9.28e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06356 - - tpra:123894908 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06356 4 125839043 125844362 Seca4g06356 4 125839043 125844362 ECH