Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06318 ATGATCAGTGATAATAAGGTGGTGACCCCCATTTTCATTTCCACACTCTCCCTCCACATGTCAAACGACGCCGTTCGGGTTCTCTTCCTCGTCGCCACCTTCCAATGCCTTCTCTTCGCCAAGGCCCACTCGGGGATCCTTCTCCCGACTCAACTCCACCGTGACTCGCTGATCTTGTCGCCGGTGAGTTGCCCTGCGCCTAACCCCAACCTCTACTACAAGCCAGTTATCGGAATTCTTAGCCACCCCGGCGATGGTGCCTCCGGCCGCCTCAGCAACGCCACCGGCGCTTCCTACATCGCCGCCTCCTACGTTAAATTCGTGGAGGCCGCCGGCGCCCGAGTTGTTCCCCTCATCTATAACGAGCCACCGGAGAAGCTTCTCAAGAAGCTGGAATTGGTTAATGGGGTTCTCTTCACTGGTGGATGGGCTAAAAGTGGTTTATATTTTGAAACGGTTGGAAGAATATTTAAGAAAGTTTTAGAGAAAAATGATGCCGGAGACCACTTCCCGCTATATGCCATCTGCTTAGGTTTCGAACTTATAACAATGATCATAAGCAAGGACAATGATATTCTTGAAGAATTTACCGCATCAAATCAGGCAAGTACTCTTCAATTTGTGGAGAATACAAACATCGAAGGAACTGTATTTCAAAGATTTCCTCCAGACTTGTTGAAGAAGTTGAATACAGATTGTCTTGTCATGCAAAATCATCGTGTGAGTATATATAGTCTATTAATTATTCTTCAACATGTTACTGAGTTACAGAATTCGACAACAATTTGA 789 0.4651 MISDNKVVTPIFISTLSLHMSNDAVRVLFLVATFQCLLFAKAHSGILLPTQLHRDSLILSPVSCPAPNPNLYYKPVIGILSHPGDGASGRLSNATGASYIAASYVKFVEAAGARVVPLIYNEPPEKLLKKLELVNGVLFTGGWAKSGLYFETVGRIFKKVLEKNDAGDHFPLYAICLGFELITMIISKDNDILEEFTASNQASTLQFVENTNIEGTVFQRFPPDLLKKLNTDCLVMQNHRVSIYSLLIILQHVTELQNSTTI. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06318 262 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 26 243 IPR015527 GO:0008242
Seca4g06318 262 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 66 262 IPR015527 GO:0008242
Seca4g06318 262 Gene3D - 72 260 IPR029062 -
Seca4g06318 262 SUPERFAMILY Class I glutamine amidotransferase-like 75 245 IPR029062 -
Seca4g06318 262 Pfam Peptidase C26 75 184 IPR011697 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06318 Seca-Chr4 125104527 125110661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06318 K01307 - gmx:100796947 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06318 4 125104527 125110661 Seca4g06318 4 125104527 125110661 ECH