Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06315 ATGGCGCAAACCGAAACCCTAGCCTTGATTCATGAGATCGAATCTCTCGTCTCCGATAAACTTCAAGTGGTTTCATACAAGTGGCTAAGTCGCAGTTATATGGTATCATCCGATGAAGCGAAGAGGTTGCTTCTGGAGTTTGTTCAAAAGCATGAGGGTGGGTTGGAAGTGGTGTATGCTTTGTCTGGCTGGTTAAAGAGTAGCAATCCTAGTTACCACATAAGGCTTGTTACCGGGCCACAGCTCGCAGAAGCACAAAAAGAATTTGATGGGAATTGCTCAGTTCAGATATACAGTGTGCAAGCAAGCATTCCAAAGGATCCAGCTGTGCTTTGGAATGCAGAATTCGTTCAAGCAGAGGAGCTCTTCAAGCAGCCCTCGTCAGTTGACAATTGCTTGAGGGATAATAGGTTCTGTGGGATCTCTAATTCTTCTGTCCGAAGGAATGTCGATGGCCCACCAGTAGTTTCTGCCACCCCACAGGCAAAATCTGTAGTAGGCATGGGACCAACTAAGAGTAACGTAGTTCACCAACCTCCAAAAAATATAGTGCATGATTCTATTGCTAAAGTTGATCTCAAATCACAGAATGTGGTGAAAGATGTCAAGAGTGAAAGCAATGGTACGGAGAAAACTGTAGTTCATGATAACATCAATAAACCTACTGCAGACAAAGAAAAGGCCCTTCCCTTGCCCACAGGCAAAAAGAAAGTACAAGCTGATAAAAATGGTCCTGTTACTGGAGGTTCATTGGCAAGCTTGTGGGGTCGTGCATCTGCAAAACCCAAGCCTTGCTCCCTGCAAGCTGAAAATAGTAACACAGTTTCAAAGCCTGCTGAAGCTGTTGAAGATGCCCAAACTTGTGCTCATGAAGCAGGAGAGGGTGATAGTGGTGATGATGATAAGCAAGATGTAACCATAAGAAGATCATCCAATAGGAAAAGGAGGGTTGTCTTTGATTTCTCAGATGAAGATGAAGATGAAGAAGCCATCAATTTAGCATCACCTGATTTCCCAAATAAACAATCATCTCTAGATTCCAGACAAAGTGACAAAAAATCATCAGAGAAAGCCACTTTGGATTTTGAATCGCAGAAAGAAAATAAATCAAGGGTTAAGGATGAGAGAGCAACTGAGCAAAAGGCTCATCAACCACTGAGAGAAGATGTATCAGTTATGAGCAAGTGCACGAGTACTGGGAAATCATCCACTGAGAAGTTGCAGCATTGTGCTCCTGAAATTTGTGTAAATAAGGATAGTGTTAAAAAAGCCACTCCAGGTTCACCTAAGAGGAGAAAAGTAATGAAGACCAGAATTGATGAACGAGGGAGAGAAGTGACTGAAGTAGTCTGGGAGGGGGAGGAGACAGAAGCAAAGAAAGATGATAAGGTTACAACAAAGAAAGCTGATAATAATCCACCTACCAATGCTGTCAACAGTGCTCCGGAAACTAAGAAGCCACCAGCTGTATCAAATAATACTACTGGAAAAGGTGGAAGCAAGAAAGCAGGAAAACAAAAGGATCCCAAACAAGGAAATATTCTTTCATTTTTCAAGAGAGTTTGA 1566 0.4246 MAQTETLALIHEIESLVSDKLQVVSYKWLSRSYMVSSDEAKRLLLEFVQKHEGGLEVVYALSGWLKSSNPSYHIRLVTGPQLAEAQKEFDGNCSVQIYSVQASIPKDPAVLWNAEFVQAEELFKQPSSVDNCLRDNRFCGISNSSVRRNVDGPPVVSATPQAKSVVGMGPTKSNVVHQPPKNIVHDSIAKVDLKSQNVVKDVKSESNGTEKTVVHDNINKPTADKEKALPLPTGKKKVQADKNGPVTGGSLASLWGRASAKPKPCSLQAENSNTVSKPAEAVEDAQTCAHEAGEGDSGDDDKQDVTIRRSSNRKRRVVFDFSDEDEDEEAINLASPDFPNKQSSLDSRQSDKKSSEKATLDFESQKENKSRVKDERATEQKAHQPLREDVSVMSKCTSTGKSSTEKLQHCAPEICVNKDSVKKATPGSPKRRKVMKTRIDERGREVTEVVWEGEETEAKKDDKVTTKKADNNPPTNAVNSAPETKKPPAVSNNTTGKGGSKKAGKQKDPKQGNILSFFKRV. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06315 521 MobiDBLite consensus disorder prediction 391 406 - -
Seca4g06315 521 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 520 IPR019038 GO:0005634|GO:0006260|GO:0043625
Seca4g06315 521 MobiDBLite consensus disorder prediction 287 321 - -
Seca4g06315 521 MobiDBLite consensus disorder prediction 469 500 - -
Seca4g06315 521 Pfam DNA polymerase subunit Cdc27 23 520 IPR019038 GO:0005634|GO:0006260|GO:0043625
Seca4g06315 521 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 6 148 IPR041913 -
Seca4g06315 521 MobiDBLite consensus disorder prediction 433 468 - -
Seca4g06315 521 MobiDBLite consensus disorder prediction 200 407 - -
Seca4g06315 521 FunFam DNA polymerase delta subunit 7 149 - -
Seca4g06315 521 MobiDBLite consensus disorder prediction 265 280 - -
Seca4g06315 521 MobiDBLite consensus disorder prediction 420 521 - -
Seca4g06315 521 MobiDBLite consensus disorder prediction 346 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06315 Seca-Chr4 125066689 125073303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06315 K03504 - gmx:100812372 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06315 4 125066689 125073303 Seca4g06315 4 125066689 125073303 ECH