Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06313 ATGCTAGAGATTTGGGATGCTCTTCGAGCTGCTGCTGAGGCTGATCTATCTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCTAAGTATGAGCTACCCAAGTACGTTTTGAGTGAGCCAACTAACCTGATTCGGGACAAGAGTAATTCTCATCATTTCTTGGTCAGCGTTCTAGATAGATTGTGTCCAACTGGGCCACTCCAATTGGGGCAGCATATTTCATCCCGTAGCTTCAGTCCGTTGCTCTGTGAGTTTGAAGGATTTCTTATGCAATTTTCTTTTCTTATGCAGTCTTCTTTTCTGGACCCTTACAACTTTGCTTTCCTCTCTTCAATTTCGTTTCTTTCCTCCTCTCTTTATGTGATGGTTCGCTTCCGTCCTCCTTCCGCTGGGGCTGCCCCTCTTCTTCACCTGGTCCAACTACTGACTCCATCATTGAACTTGTGCCTCGATCTATTACTCTTGCTATTCTGTCAAGGTCGCCCCTTCCTCGAGCATTCGACAGAGTCTCGAAAATGGATTTCTTGTATTCCATTTGTAGAGCGTCCTTTTGATATTTCCATGACGCCTTCTCTTGAATTGGGTCCTTCTCTTCTTCACTCACGGATCATTACAGAGGAGTTCCCTTGGTCACCCATTTTTTTTGTTAGTAAGTCTTCTCATCCTAATGGCCAGAAACACTCAGAGGACGTGAATGCGCTGGTTCAACGACGGAGTTGCAAAACTTATACTTTTCTAACACCATGGGGGGAATTTGCTCCAACTCTAAATGATGTTGCTATTCTTTTGAAATTGCCATTTTTTGGGGATTTTGATCTTTCTGTTACTGTTCTGGATCGTCATGTTGCTGAAATGGCCAAATCATTGAAAATTGCTACTGTTGAGAGCACGGAGCATTCTCATGAGAAACTCACCTTCCAGTGTTTTCAGCAAGGGGGTGATGTTGCTTCCTCTGTTGTAAAGATGTGTTTGCTGAAAGAAAATGGTTCTAAAGGTCCTCCTCCCCCAAAAAAAAAATCGCCTAAGGAATCTGTGAAGTATACCTATGTGTCTTGGATTCGTTATTTCTTTGGCGATTTTCCTAATAGTGATCTTTTTTAG 1149 0.4291 MLEIWDALRAAAEADLSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDKSNSHHFLVSVLDRLCPTGPLQLGQHISSRSFSPLLCEFEGFLMQFSFLMQSSFLDPYNFAFLSSISFLSSSLYVMVRFRPPSAGAAPLLHLVQLLTPSLNLCLDLLLLLFCQGRPFLEHSTESRKWISCIPFVERPFDISMTPSLELGPSLLHSRIITEEFPWSPIFFVSKSSHPNGQKHSEDVNALVQRRSCKTYTFLTPWGEFAPTLNDVAILLKLPFFGDFDLSVTVLDRHVAEMAKSLKIATVESTEHSHEKLTFQCFQQGGDVASSVVKMCLLKENGSKGPPPPKKKSPKESVKYTYVSWIRYFFGDFPNSDLF. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06313 382 Pfam Ubiquitin-binding domain 3 62 IPR032752 -
Seca4g06313 382 Gene3D - 1 53 IPR038169 -
Seca4g06313 382 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 3 73 IPR039869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06313 Seca-Chr4 125035709 125039291 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06313 - - vra:106778147 109.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06313 4 125035709 125039291 Seca4g06313 4 125035709 125039291 ECH