Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06311 ATGAGAAGTTACGCTTTCTTTTTGTATACTCTCATTGCACTTGCTGCCACTGCCACTTTCTCTCTCCGCTTTCAAGCTCACGCTGCTCCTGCAGGGCCATTGATTAAGCATCTATCTTCACTCATCAAATGGACAAGGTCTGCCTCCAAGACGCCACACTCAGATGGGAATGTTCTTCAATTTGAGAATGGTTATGTTGTTGAAACTGTTGTGGAAGGAAACGAGATTGGTGTCATCCCTTATAGGATCCGTGTCTCTGAGGAGGATGGTGAACTCTTTGCTGTGGATGCAATTAATAGCAACATTGTTCGAATTACCCCACCATTGTCCCAATATAGTAGAGGAAGATTGGTAGCTGGATCATTTCAGGGCTACACTGGTCATGTGGATGGAAAACCAAGCGATGCTCGTTTTAATCATCCCAAAGGCATTACCATGGATGATAAAGGGAATGTTTATGTTGCTGATACTCAGAATCTGGCCATCAGAAAGATTGGAGATGCCGGTGTAACAACCATTGCTGGAGGAAAGTCAAATGTTGCAGGCTACAGGGATGGGCCTAGTGAGGATGCTAAATTCTCAAATGATTTTGATGTGGTATATGTTCGGCCCACCTGTTCCTTGTTGGTCATTGATAGAGGAAATGCTGCTCTTCGGCAAATCTTTCTTGACCAGGAAGACTGTGATTATCAATCTAGTTCAATTTCCAGTACAGATATCCTTACTGTGTTAGGTGTTGTTATGGTAGGATATGCTACATGCATGCTTCAGCGGGGACTTGGATCCTCTTTATTCTCAAAAACACAGCGACCATCAGAAAGAGAGTTTAAAGGGCAAGCAAGCAATGAGAAACACATGCCAATCCTGGAGAGCAGTAAAGAGGAGCCAGGATGGCCGTCTTTTGGACAGCTTATTGCTGATCTTTCTAAGCTCTCCCTTGAAGCATTGGCCAGTGCATTCACTCAATTCATACCCTCACATTTCAGACCTGGCAGTTCCAATAGAGGCCTAACACCACTGAAAGATCGTCTTGTGATGCCTGAAGATGAAGTGCGGCCTCCATTGGTCAATAGGCAAAGCGCTCCTGCTCCTCTTGCTGAAAATAGGCAGGTGCCACTGGTCCATACTCCAAGCACAGCTGAGAAATATTCAGAAATAAAGCCTCCAAAGATTAAGTCAAGCAGTTTCAAGGACCCTTCTTTGTCAAGTAAGCACCGATCTTCAAAACGAGCTGAATATGCTGAGTTCTATGGATCTTCTGAGATCCCACCATACACAAAGTCTAAGAGCCAGAAAGAAAGGCCAAGACATCGGCAACGAGAAAAGAGTGGAGAAGTTGTTTTTGGGGCAGAGGCTAAACCTGTTGAGGCAAGTGCTGTTGATCATAGCAATCCAAAGTTTGACCATTATAGTATGAGGACTAAGTATTTATCTGGGGAGTCCTTCCGATTCAACACTCAGTAA 1464 0.4433 MRSYAFFLYTLIALAATATFSLRFQAHAAPAGPLIKHLSSLIKWTRSASKTPHSDGNVLQFENGYVVETVVEGNEIGVIPYRIRVSEEDGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITMDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQIFLDQEDCDYQSSSISSTDILTVLGVVMVGYATCMLQRGLGSSLFSKTQRPSEREFKGQASNEKHMPILESSKEEPGWPSFGQLIADLSKLSLEALASAFTQFIPSHFRPGSSNRGLTPLKDRLVMPEDEVRPPLVNRQSAPAPLAENRQVPLVHTPSTAEKYSEIKPPKIKSSSFKDPSLSSKHRSSKRAEYAEFYGSSEIPPYTKSKSQKERPRHRQREKSGEVVFGAEAKPVEASAVDHSNPKFDHYSMRTKYLSGESFRFNTQ. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06311 487 SUPERFAMILY NHL repeat 62 174 - -
Seca4g06311 487 Pfam NHL repeat 138 164 IPR001258 GO:0005515
Seca4g06311 487 Gene3D - 42 222 IPR011042 -
Seca4g06311 487 PANTHER - 31 476 - -
Seca4g06311 487 MobiDBLite consensus disorder prediction 345 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06311 Seca-Chr4 124966583 124973122 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06311 - - gmx:100797841 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06311 4 124966583 124973122 Seca4g06311 4 124966583 124973122 ECH