Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06299 ATGGAATCAGTGAAGCCATCAGCAGTGACCCCAAGCAAGAAACTGGCTCGCAGTTTTGCTAAGGTTCTTCATCTTAGAGCTCTGATTGGAATTGCATCAGTTGATGGGCTGAAGAATGCTGTGTCTGATGCAAATCTCAAGGATGAAGCAAACATGGGTAAGACTACACTAAATTGGTCTGAATCTTTCAACAAAGATGATGATGAAGAGTTTCAGGAAAGAGTTGCCCAAGAAGCTCTCCTTGCTAAGCTGTTTGCTAGCATTTCAATTGTTAAAGCTGCATATGCTCAAATCCAGTATGCTCAGTCACCTTTTGACCCTGATGGAATTGAAGCTGCTGATCAATTGCTTGTGTCTGAGTTGAAGAACTTGTCTGAGCTAAAGCAATGTTATTTGAAGAAACAATTTGATCCTTCACCAGAGACAGCAATTCTTGCAGCTGAGTCAAAGGAGCTTGAGGGTGTCATAAAAACTTATGAGATTATGGGTAAGAAGTTGGAATCACAGGTGCTGCTTAAGGATTCTGAGATTATGTTTCTTAGAGAGAAGTTAGAGGAAGCTAATAAGCATAACAAGTCAATTGAGAAGAGATTGAATCAAAGTGGGCAATTATCTGTACTTGATAATCTTCATATTTCAGGATTAAGTCCTAGCCATTTTATTACTGTTCTTCGCCACACAGTTAGGTCCATTAGAAGCTTTGTGAGGTTGATTGTGGATGAGATGAGATCTGCAAATTGGGATATTGATGCTGCTGTTGATGCTATTCAAAAGGATGTGGTTTACTGGATAGAAGATCACAAGTGTTTCACAATTGAGTCTTTTGTTAGTATGGAAATGTTTGATGCTTTCCACTTCCCTAACTTCTCCCTTCCAAATGAGTCTCTCCCAGATAGAAACAAGCGCCAACAATGGTTCTTTGGGAGGTTCAATGAGCTTAAATCCATGAAAGCAAAGGACTTTCTTGCTGAGAAGCCAAGATCATCATTTGCAAAATTTTGCAGGATCAAGTACTTGAGACTTGTTCATCCTAAGATGGAGTCATCATTCTTTGGTAACTTGAGTCAGAGGAACCTTTTGAGTGCTGGAGAGTTTCCAGACACTGCATTCTTCACATCATTTGCTGAGATGGCCAAGAGGGTATATCTCCTACATTGCTTAGCCTTCTCATTTGAGCCTCAAGCTTCAATCTTTCAAATTGGGAGAGGGTGTAGATTCTCTGATGTGTACATGGAAAGTGTTAATGATGAAATGTTCCTCCATTCAGACCAAACAGTTGAATCAGATCCACAAGTTGCTTTCACAGTTGTTCCAGGGTTTAGGATTGGTAAAACTGTTATACAGTGCCAAGTGTACCTCTCACAGCACCAAACCAAGGTTAAAAAGTTCACTTCCATGAAGCAAAGGTAA 1410 0.4007 MESVKPSAVTPSKKLARSFAKVLHLRALIGIASVDGLKNAVSDANLKDEANMGKTTLNWSESFNKDDDEEFQERVAQEALLAKLFASISIVKAAYAQIQYAQSPFDPDGIEAADQLLVSELKNLSELKQCYLKKQFDPSPETAILAAESKELEGVIKTYEIMGKKLESQVLLKDSEIMFLREKLEEANKHNKSIEKRLNQSGQLSVLDNLHISGLSPSHFITVLRHTVRSIRSFVRLIVDEMRSANWDIDAAVDAIQKDVVYWIEDHKCFTIESFVSMEMFDAFHFPNFSLPNESLPDRNKRQQWFFGRFNELKSMKAKDFLAEKPRSSFAKFCRIKYLRLVHPKMESSFFGNLSQRNLLSAGEFPDTAFFTSFAEMAKRVYLLHCLAFSFEPQASIFQIGRGCRFSDVYMESVNDEMFLHSDQTVESDPQVAFTVVPGFRIGKTVIQCQVYLSQHQTKVKKFTSMKQR. 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06299 469 Coils Coil 177 197 - -
Seca4g06299 469 Pfam Plant protein of unknown function (DUF641) 74 197 IPR006943 -
Seca4g06299 469 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 454 IPR040225 GO:0009639|GO:0009959
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06299 Seca-Chr4 124744051 124749710 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06299 - - gmx:100810236 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06299 4 124744051 124749710 Seca4g08216 4 194971689 194976495 ECH
Seca4g06299 4 124744051 124749710 Seca4g06299 4 124744051 124749710 ECH