Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06172 ATGGGGAACCCCACTACTGAGTCCTGTGCATCCTCTCACAAGTCCCCTGAGACTGAAAATGATAGTGATTTTAGAGTTCATGTGTTCTCTTCATCAACAGAGTTGCTTGAAAAGCTTCATAAAAAATGGAGTTCAGTGGAGAAACAACCATACCCAGCTATGTATTCTAGTATATATGGAGGTATCATACTTGATCCAGCAATGATGGTAATCCCCATTGATGATCACATGGTACATAGAGGACATGGTGTGTTTGATACCGCTATTATTTTAGATGGATACCTCTATGAGTTGGATGTTCACCTTGACCGTTTCCTAAGGTCAGCCTCCAAAGCAAAGATATCCTCTCCCTTTCCTCGTTCAACTCTTCACAGCATTCTAATACAACTAACTGCAGCATCAAAGTGTAAGAAAGGGACTCTAAGATACTGGCTGAGTGCAGGTCCTGGGGATTTCTTGCTGTCATCAGCAGGATGTTCAACATCTGCATTCTATGCAGTAGTCATTGACCAAGACTTTTCCCAATGCAAAGAGGGGGTTAAAGTGATTACTTCCACTATACCAATGAAGCCACCTCTCTTTGCCACAATGAAAAATGTGAATTATCTTCCAAATGTTCTTTCAGTATTGGAAGCTGAAGAGAAAGGAGCATTTGCTTCTATATGGGTTGATGAGGCTGGTTATATTGCTGAAGGTCCTAATGTTAATGTTGCTTTTATAACTCAAGAAAAGGAACTTGTCATGCCACTTTTTGATAGTATCCTATATGGTTGCACTGCAAAGAGGCTTCTTGAACTAGCACCAAAGTTGGTTGATCAAGGGCTTCTGAAAGGTGTAACAACTAAAAATCTGACTGTGGAGGAAGCTAAAGCTGCTGCTGAAATGATGTATGTAGGAAGCACACTTCCTGTGTTGCCTATCATCATGTGGGATGATCAACCCATTGGCAATGGAATGGTTGGAGAATTAACAATGTTACTTTCTGATTTGCTATGGGATGATATGGTAGATGGCCCTGACACACAGAGAATACCAGTTCCTTACGTTCAGTGA 1053 0.4112 MGNPTTESCASSHKSPETENDSDFRVHVFSSSTELLEKLHKKWSSVEKQPYPAMYSSIYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGYLYELDVHLDRFLRSASKAKISSPFPRSTLHSILIQLTAASKCKKGTLRYWLSAGPGDFLLSSAGCSTSAFYAVVIDQDFSQCKEGVKVITSTIPMKPPLFATMKNVNYLPNVLSVLEAEEKGAFASIWVDEAGYIAEGPNVNVAFITQEKELVMPLFDSILYGCTAKRLLELAPKLVDQGLLKGVTTKNLTVEEAKAAAEMMYVGSTLPVLPIIMWDDQPIGNGMVGELTMLLSDLLWDDMVDGPDTQRIPVPYVQ. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06172 350 PANTHER AMINO-ACID AMINOTRANSFERASE 33 339 - -
Seca4g06172 350 FunFam D-alanine aminotransferase 171 338 - -
Seca4g06172 350 Gene3D - 22 168 IPR043131 -
Seca4g06172 350 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g06172 350 FunFam D-amino-acid transaminase, chloroplastic 31 169 - -
Seca4g06172 350 Pfam Amino-transferase class IV 83 307 IPR001544 GO:0003824
Seca4g06172 350 Gene3D - 169 344 IPR043132 -
Seca4g06172 350 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 59 336 IPR036038 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06172 Seca-Chr4 121158219 121161277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06172 K18482 - gmx:100798871 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06172 4 121158219 121161277 Seca4g06172 4 121158219 121161277 ECH