Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06037 ATGGCGTCGGTCCACAGCGCCGTCCCTCCGCAGCACAGCTTCTTGCCATCAATTTCCAGAGGAAAATCCAAAGCAAAGGCCTCTCACGCGAAATCCATTCCCAAGACGCAGCAGAACTTTCCGGTCTCCAGATTTTCCCGGAATTCGATTTTCTCAGGAAACAAACGGGCGTCAGTGGTGGCGAACTCCGCGGTGGACGAGCTGGACGTGATACCGGTGCAAAGCAATGATATTACGGATCAGCAAGAGGGCGTGGTGGTGAACCGTGTGGAGATGGACAGTGGAGATGGCGAGTTGACCACACAAGTGAGTGGATTCGGAGCGAACGACGGTTTGTTATCGTTGGAAGGGTTTTCTTCTTCGTCTTCTTCGGGTTTGGTTGGGAATGAGAGCGAGGAGAACATGGAGAAGCTGGTAGATAGGACTATCAATGCTGCTATTGTGCTTGCAGCTGGTACTTTTGCTCTCACCAAGCTTCTTACAATTGATAGTGATTACTGGCATGGATGGACAATTTATGAGATATTAAGATATGCACCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCAGTTTTTGCCAAGATGGTGATCAGTGGGGTTGTTTACTCCGTTGGGGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTTGAGTTTGACCGGGCAAGGATGTTCAGATCAGGGCTTGTTGGATTTACTCTACATGGCTCTCTTTCTCATTACTATTATCAGTTTTGTGAGGAGCTATTTCCTTACAAAGGATGGTGGGTAGTCCCTGCCAAAGTTGCCTTCGATCAAACTGCATGGTCGGCAGTTTGGAACAGCATTTATTATACAGTTGTGGGATTCCTGCGTCTTGATTCTCCTATCAACATTTTTAATGAATTGAAGGCGACATTTTTTCCCATGTTGACTGCAGGGTGGAAGCTGTGGCCATTTGCTCATCTCATTACTTATGGTGTAATACCAGTTGAGCAAAGACTTCTTTGGGTGGATATGGTAGAGCTTATTTGGGTGACCATACTTTCAACATATTCAAATGAAAAATCAGAAGCAAGAAACTCTTCGGCGCCTACAGAAGTGAAATCTACTACATCTGTTTATCCTCCTGAGGAGTAA 1137 0.46 MASVHSAVPPQHSFLPSISRGKSKAKASHAKSIPKTQQNFPVSRFSRNSIFSGNKRASVVANSAVDELDVIPVQSNDITDQQEGVVVNRVEMDSGDGELTTQVSGFGANDGLLSLEGFSSSSSSGLVGNESEENMEKLVDRTINAAIVLAAGTFALTKLLTIDSDYWHGWTIYEILRYAPQHNWSAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFTLHGSLSHYYYQFCEELFPYKGWWVVPAKVAFDQTAWSAVWNSIYYTVVGFLRLDSPINIFNELKATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDMVELIWVTILSTYSNEKSEARNSSAPTEVKSTTSVYPPEE. 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06037 378 Pfam Mpv17 / PMP22 family 289 349 IPR007248 GO:0016020
Seca4g06037 378 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 183 350 IPR007248 GO:0016020
Seca4g06037 378 MobiDBLite consensus disorder prediction 1 39 - -
Seca4g06037 378 MobiDBLite consensus disorder prediction 357 378 - -
Seca4g06037 378 MobiDBLite consensus disorder prediction 357 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06037 Seca-Chr4 117626015 117630356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06037 187 357 Miscellaneous Gene Families AT2G14860 26.901 4.96e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g06037 K13348 - gmx:100805057 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06037 4 117626015 117630356 Seca4g06037 4 117626015 117630356 ECH