LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g05907	ATGGAGGGTGAAGGCAAAGCCATAGGATCCAGTGCTGCTAAGAAGCCCTCACGGAGTACCAGAGCTAATCTTCAATTCCCCGTCGGTCGTGTTGCTCGATACCTCAAATCTGGAAAATATGTTGAGCACCTTAGTGTTGAAGCCCCAGTATACCTTGTTGCTGTCCTTGAATATCTTGTTGTTGAGGTAATTTTGTTCCAGGTTTCTCATTTCATTTTCTTTTTCTATTTGTATTTGTTTCCAAATCTAAGGTTTCGAAATTTGGAGTTGGCTGGAAATGTTGTGATGGATAACAAGAAGACTCGTATTGTGCCTCGCCATATTCAATTAGCGATTAGGAACGATGAAGAGTTGAGCAAGCTTCTGGGAGATGTGATCATTGCTAATGGCGGCGTGAAGCCCAATATTACTTGTTGTTTCCTAAGACGACTGGAACCTCATCGAAGGACACTAGTGATGACGATGAAGCTTAAATGGCGCTTGATTTTACATGAATTGTTGCCAAATTTAGTTTTATATCTTAAAAGCTTTAAATAG	537	0.406	MEGEGKAIGSSAAKKPSRSTRANLQFPVGRVARYLKSGKYVEHLSVEAPVYLVAVLEYLVVEVILFQVSHFIFFFYLYLFPNLRFRNLELAGNVVMDNKKTRIVPRHIQLAIRNDEELSKLLGDVIIANGGVKPNITCCFLRRLEPHRRTLVMTMKLKWRLILHELLPNLVLYLKSFK.	179

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g05907	178	MobiDBLite	consensus disorder prediction	1	21	-	-
	Seca4g05907	178	SUPERFAMILY	Histone-fold	5	137	IPR009072	GO:0046982
	Seca4g05907	178	Pfam	C-terminus of histone H2A	116	136	IPR032454	-
	Seca4g05907	178	PRINTS	Histone H2A signature	14	36	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Seca4g05907	178	PRINTS	Histone H2A signature	43	58	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Seca4g05907	178	PANTHER	HISTONE H2A	13	141	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Seca4g05907	178	Gene3D	Histone, subunit A	1	148	IPR009072	GO:0046982
	Seca4g05907	178	SMART	h2a4	3	147	IPR002119	GO:0000786\|GO:0003677\|GO:0030527
	Seca4g05907	178	CDD	H2A	6	136	IPR002119	GO:0000786\|GO:0003677\|GO:0030527

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g05907	Seca-Chr4	113545309	113546012	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g05907	K11251		-	fve:101292676	144.821

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca4g05907	4	113545309	113546012	Seca4g05907	4	113545309	113546012	ECH