Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05855 ATGGAGGAACTATTCGTAGCTATACTGTCGATGCTTCTGGTGGTAGCACTGATCCCACTCTACCTATGGAAGCGCCATCAGGGTTCTCGATCGTCCTCTCACCACGAAGAACCTCACCAGGCTCCGCGGAGAGAAACCGTGGTGCGCGCCACCGCCACTCGCCGCATGCGTCGGAGACCGGCTGCGTCTGGAGCTAGCACTTCATCAGATCCACCTGCAACGCTACAAGAGTCTGCAGATGAAAGTGACGATGAAGGTGCTGATGGTGAGTATTATGAGGCTAAAGCATCAAAGAAAAAGGAAATGAGAAGGCAAGAGAGGGAAGCACGACGGCAGGCTGATGAAGCTGCACGAGAGTCAAGGCAGGCAAAACAAGATCGTTATTCAGAAATGCGGAGGCGGAAGGATGAAGAGCGCGAGGCACAGGAGCGAATGTTGGAAGAGGAAGCCAAAGCTCAGAAGGCTAAGGAGGAGGAAGCTGCTGCATTGGAGTTTGAGAAGTGGAAAGGTGAATTTTCAGTTGACGATGAAGGTACCCTTGAAGAAGAGCAGGATAATACTGAAGACTTGCTAGCCAATTTTGTTGAATATATAAAGAAGCACAAATGTGTTCCCTTAGAAGATCTCGCTGCAGAATTTAAATTGCGTACACAGGAATGTATCAATCGCATCACAACTCTGGAAAGTATGGGTCGGCTTTCGGGTGTCATGGATGATAGGGGAAAGTTTATCTACATCTCACAAGAAGAAATGAAAGCTGTTGCTGATTATATTAAGCGGCAAGGGAGGGTTAGCATTTCCCACTTAGCTAGTAAATCAAACCAGTTCATTGATTTAGAGCCGAAAGCTCAGTACACTGAGGACATAAGTAATGTGGAGGAGATTACTGTCAGCTGA 897 0.4771 MEELFVAILSMLLVVALIPLYLWKRHQGSRSSSHHEEPHQAPRRETVVRATATRRMRRRPAASGASTSSDPPATLQESADESDDEGADGEYYEAKASKKKEMRRQEREARRQADEAARESRQAKQDRYSEMRRRKDEEREAQERMLEEEAKAQKAKEEEAAALEFEKWKGEFSVDDEGTLEEEQDNTEDLLANFVEYIKKHKCVPLEDLAAEFKLRTQECINRITTLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKAQYTEDISNVEEITVS. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05855 298 Gene3D - 189 246 IPR036388 -
Seca4g05855 298 MobiDBLite consensus disorder prediction 30 52 - -
Seca4g05855 298 MobiDBLite consensus disorder prediction 30 159 - -
Seca4g05855 298 SMART DDRGK_2 94 278 IPR019153 -
Seca4g05855 298 Coils Coil 92 166 - -
Seca4g05855 298 MobiDBLite consensus disorder prediction 62 76 - -
Seca4g05855 298 FunFam DDRGK domain-containing protein 1 189 246 - -
Seca4g05855 298 Pfam DDRGK domain 95 277 IPR019153 -
Seca4g05855 298 MobiDBLite consensus disorder prediction 89 159 - -
Seca4g05855 298 SUPERFAMILY "Winged helix" DNA-binding domain 184 254 IPR036390 -
Seca4g05855 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 96 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05855 Seca-Chr4 112255053 112259883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05855 K23344 - gmx:100810584 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05855 4 112255053 112259883 Seca4g05855 4 112255053 112259883 ECH