Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05311 ATGGCCTTGCCAAGTGCTGAATACACTACAGGCTTCACTCATGCCTTGCGAACCTTAATTGAGAAAACATGGGCCAAGTTGGTTAAGGTCACAAAGAAAGGAAAAATGCTTGTACAAGATGACCCCAGACGGGTTATTCATTCCTTCAAGGTGGGATTTGCACTCGTATTGATTTCTATTTTGCAATATTTTCGTCCATCCTTCTATGGTTTTGGTGACAACATAATCTGGGCAGTTCTCACCGTCGTTCTTGTCCTTGAATTTTCTGTGGGTGCAACACTCGGAAAAGGTTTAAACAGAATGTTGGCAACGGCATTAGCTGGTGCTTTGGGAATTGCGACCCATAGATTAGCAACTCTTTCTGGAGAGAAGGGAAAGACTGTACTCACTTCAATCTTTGTTTTTGTCATTGGTAAGTTAGTTACTGAAACGGTGACGTTTATGAGATTTTCGCCTCGATTGAAGGCGAGATACGATTATGGGATGTTAATATTCATTTTGACCTTCTGTATGGTATCTCTTGCCAATAATACGGATAAAGAACTCCTAGAAATCGCCCACGAGAGGCTATTAACAATCATCATTGGGAGCTGTTTATCTATTATGGTATGTATTTGCATATGCCCTGTTTGGGTTGGCAAAGATCTTCACAATCAGATTGCTGCCAACATTGAAAAGATCGCAGACTTCATGGAAGGTACGTATGCAGGATTTGGAGATGAATACTTCAATAATACAGAGACGACAGAAGCTGGAGAGGATAAGCCGTTTCTCCATAGATATAAAAGTGTCCTCTCTTCAAAAAACAGTGAAGAAACAATGGCTCTTTTGGCAAGATGGGAACCTTGTCATGGCCGGTTCAGATTTCGTCATCCATGGAATCAATACTTAAAGATTGGGAACCTAACACGGTTGTGTGCTTACAAAATTGAAGCTCTTAGTGTCTACCTCTTCCACTCAGAACAAACCCCATATGAACTTCGAAGCAGGATTCAAGAACCATGCACAAATATTAGCTTGGAATCTGGGAAGGCTCTTAAAGAAGCATCTTTGTTAGTTAAAAATATGACCAAGTCATCAACGCCAAACCTCCATGTTACGAATGCTAAAAATGCTGCTGAATCTCTCAGATCCGTATTAAGAGCAAACCCATGGGACGGAGCTGATCATCTGGAGATAATACCCGCTGCTACGGTGGCGTCACTACTAATTGATATTGTGAATTGCGCTGAGAAAATTTGTGAAGCTGTTGAAGAACTAGCTTCCCTTGCTAATTTTGTGCCTTCTGAGTTGCTCCATCGGGGAACAGTGCAACCAATTTCTGATCATCATGGTTCAGTTCATGTCATCACCGTCAGTGAATGA 1365 0.4154 MALPSAEYTTGFTHALRTLIEKTWAKLVKVTKKGKMLVQDDPRRVIHSFKVGFALVLISILQYFRPSFYGFGDNIIWAVLTVVLVLEFSVGATLGKGLNRMLATALAGALGIATHRLATLSGEKGKTVLTSIFVFVIGKLVTETVTFMRFSPRLKARYDYGMLIFILTFCMVSLANNTDKELLEIAHERLLTIIIGSCLSIMVCICICPVWVGKDLHNQIAANIEKIADFMEGTYAGFGDEYFNNTETTEAGEDKPFLHRYKSVLSSKNSEETMALLARWEPCHGRFRFRHPWNQYLKIGNLTRLCAYKIEALSVYLFHSEQTPYELRSRIQEPCTNISLESGKALKEASLLVKNMTKSSTPNLHVTNAKNAAESLRSVLRANPWDGADHLEIIPAATVASLLIDIVNCAEKICEAVEELASLANFVPSELLHRGTVQPISDHHGSVHVITVSE. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05311 454 Pfam Aluminium activated malate transporter 37 421 IPR020966 GO:0015743
Seca4g05311 454 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 19 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05311 Seca-Chr4 99589297 99593387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05311 26 452 Miscellaneous Gene Families AT1G08440 46.330 1.08e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05311 K25841 - gmx:100786663 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05311 4 99589297 99593387 Seca4g05311 4 99589297 99593387 ECH
Seca4g05311 4 99589297 99593387 Seca4g04511 4 82855405 82858083 PCT