Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05201 ATGGGCTACTCAACAAGACTCTGTTCTTTCTTATTATTGGTATTGTTGCTGGTGGCATGTGCTAATGCAGAGGACCCTTACAGGTTCTACACTTGGAATGTCACTTATGGAGACATTTATCCACTCGGAGTTAAACAGCAGGGAATATTGATAAACGGGCAATTCCCAGGGCCACAGATTGAGTCCGTGACCAATGATAACTTGATTATCAATGTTTACAACAGCTTGGATGAACCTTTCCTCATTTCCTGGAACGGAGTGCAGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACCAATTGTCCAATCCCATCAGGGCAGAACTTCACTTATGTTCTTCAAGTAAAGGATCAGATTGGTAGCTACTTCTACTTTCCTTCCCTTGCATTCCACAAGGCAGCAGGAGGTTATGGTGGTTTCAAAATTGCCAGTCGCTCAGTCATTCCTGTACCTTTTGATCCTCCAGCAGGAGATTTCACCATATTGGCAGGAGATTGGTACAAGAGAAATCACACAGATTTGAGGGCCATATTAGATAATGGAAGTGACCTTCCTTTCCCTGATGGGCTTATCATCAATGGTCGTGGTTCCAATGGCTACACATTCACAGTTGATCAAGGCAAGACTTACAGATTCAGGATATCAAATGTGGGGCTCACCACTTCTATTAATTTCAGAATCCAAGGGCATAAGATGATGCTTGTTGAGGTGGAAGGAACCCACACTCTTCAAAACACTTATGACTCACTTGACATTCATTTGGGGCAAACTTACTCAGTATTGGTTACTGCTGATCAACCACCCCAAGACTATTACATTGTTGTCACAACACGTTTCACATCCCAGGTGTTGAATGCTACATCCATTCTTCATTACAGTAACTCAGCAGGAGGTGTTTCTGGTCCTCTCCCTGGAGGACCAACAACTGAAATTGATTGGTCTATTGAACAAGGTTGCTCTCTCAGGAGGAATCTGACAGCAAGTGGGCCAAGACCAAATCCTCAAGGATCTTACCATTATGGTTTGATAAACACAACACATACAATTAGACTTCAAAATTCTGCTCCAGTTATCAATGGGAAACAGAGATATGCTGTCAATAGTGTGTCCTTTATCCCTGCTGATACTCCTCTTAAACTGGCTGATTACTTCAAGATCCAAGGGGTGTTCTCCCTTGGAAGTATCCCAGACAACCCCACTGGTAGTGGTGGTTACCTTCAGACTTCTGTCATGGCTGCTGATTTTCGAGGTTTTGTGGAGGTTGTGTTTGAGAATCCTGAAGACACTGTGCAATCATGGCATATTGATGGTCACAACTTCTTTGTAGTTGGAATGGATGGAGGACAATGGTCAGCGGCAAGCAGACTAAATTACAATTTAAGAGATACAATTTCTCGGTGCACGGTTCAGGTGTATCCCAAGTCATGGACTGCACTTTACATGCCATTGGACAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGCTCGTCAGTACCTAGGACAGCAATTTTACCTGAGAGTGTATTCCCCTGCAAATTCATGGAGAGATGAGTACCCAATTCCAACCAATGCTCTGCTGTGTGGCAAGGCAATAGGCCACCACACTCGGTCTTTATAA 1629 0.4389 MGYSTRLCSFLLLVLLLVACANAEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVYNSLDEPFLISWNGVQQRRNSWQDGVYGTNCPIPSGQNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGFKIASRSVIPVPFDPPAGDFTILAGDWYKRNHTDLRAILDNGSDLPFPDGLIINGRGSNGYTFTVDQGKTYRFRISNVGLTTSINFRIQGHKMMLVEVEGTHTLQNTYDSLDIHLGQTYSVLVTADQPPQDYYIVVTTRFTSQVLNATSILHYSNSAGGVSGPLPGGPTTEIDWSIEQGCSLRRNLTASGPRPNPQGSYHYGLINTTHTIRLQNSAPVINGKQRYAVNSVSFIPADTPLKLADYFKIQGVFSLGSIPDNPTGSGGYLQTSVMAADFRGFVEVVFENPEDTVQSWHIDGHNFFVVGMDGGQWSAASRLNYNLRDTISRCTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSPANSWRDEYPIPTNALLCGKAIGHHTRSL. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05201 542 CDD CuRO_2_AAO_like_1 159 294 IPR034271 -
Seca4g05201 542 Pfam Multicopper oxidase 378 513 IPR011706 GO:0005507|GO:0016491
Seca4g05201 542 CDD CuRO_3_AAO_like_1 375 497 IPR034275 GO:0005507
Seca4g05201 542 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Seca4g05201 542 SUPERFAMILY Cupredoxins 344 535 IPR008972 -
Seca4g05201 542 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Seca4g05201 542 Pfam Multicopper oxidase 160 296 IPR001117 -
Seca4g05201 542 PANTHER MULTI-COPPER OXIDASE 45 507 IPR045087 -
Seca4g05201 542 Gene3D - 158 331 IPR008972 -
Seca4g05201 542 FunFam Monocopper oxidase-like protein 344 541 - -
Seca4g05201 542 Gene3D - 27 148 IPR008972 -
Seca4g05201 542 Gene3D - 343 538 IPR008972 -
Seca4g05201 542 SUPERFAMILY Cupredoxins 156 332 IPR008972 -
Seca4g05201 542 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Seca4g05201 542 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Seca4g05201 542 FunFam Monocopper oxidase-like protein 158 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05201 Seca-Chr4 97288616 97293622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05201 - - pvy:116133901 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05201 4 97288616 97293622 Seca4g05201 4 97288616 97293622 ECH