Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05189 ATGGCGGAACCGAAAGTTAAATACGATCGCCAGCTCAGAATATGGGGTGAGCAAGGACAGGCAGCTCTTGAGAAATCCAATATTTGCTTACTTAACTGTGGTCCTACTGGTTCTGAAACACTTAAGAATCTTGTTCTTGGTGGCGTTGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGTGGGTGACCTTGGAAACAATTTTTTGGTGGATGAATCAAGCCTTGGACAGTCAAAGGCAAAATGTGTATGCTCGTTTCTTCAAGAGCTGAATGATGCAGTTAAAGCAAAATATGTAGAAGAATATCCAGAAGCATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTAGTTGTTGCCACGCAGCTGGTGGAAAATTCAATGATAAAGCTTGACCGAATCTGCAGGGAGGCAAATGTTATGCTGATCTTTGCTCGCTCCTATGGCCTAACAGGGTTTGTTCGAATTAGTTTGAAGGAACATACTGTGATTGAGTCAAAACCTGAGCATTTTCTTGATGATCTCCGGTTAAATAATCCTTGGCCTGAACTCAAGAGGTTTGCAGAGGGGATTGACTTGAACGTGCAAGATCCTGTGACTCATAAACACATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAGGCTTCCATCAACCAGAGAAGAAAAAAGGGAGTTCAAGGAGTTTCTTAAGGCTGGGATGGTTGCTCAAGATGAAGATAATTATAAAGAAGCTATTGAATCCTCATTCAAAGTATTTGCTCCCCGAGGAATTAGTAAGTAG 819 0.4127 MAEPKVKYDRQLRIWGEQGQAALEKSNICLLNCGPTGSETLKNLVLGGVGSITVVDGSKVEVGDLGNNFLVDESSLGQSKAKCVCSFLQELNDAVKAKYVEEYPEALIETNPSFFSQFTLVVATQLVENSMIKLDRICREANVMLIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWPELKRFAEGIDLNVQDPVTHKHIPYVVILVKMADEWAKSHGGRLPSTREEKREFKEFLKAGMVAQDEDNYKEAIESSFKVFAPRGISK. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05189 272 Pfam ThiF family 8 160 IPR000594 -
Seca4g05189 272 FunFam NEDD8-activating enzyme E1 regulatory subunit 1 272 - -
Seca4g05189 272 Gene3D - 2 267 - -
Seca4g05189 272 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 165 IPR045886 -
Seca4g05189 272 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 267 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05189 Seca-Chr4 96948489 96956222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05189 8 157 EF-hand Containing Proteins AT2G30110 31.579 1.19e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05189 K04532 - gmx:100793799 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05189 4 96948489 96956222 Seca4g05189 4 96948489 96956222 ECH