Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05186 ATGCTATTGGGAGTCAATGGTATGATGACTAGAAGTTTTGAGAGAGGAGTGGATGCTGACACATTGGGATTGGCTGGTCATAAACGTTTTATGAGTGACATCCCAAGTAAACCCAATGAGACAAAGTCTTATGGTCTTCGCCCATTATCTCCTCATCTTCCTGTTTATGAGCCCCAGCTTTCTGCGACACTTTCAATTTTCAATAGAATTGGAGGAGCTTTCATAGCCATTGTCATTGTGCTCTTTTATATGATATACGTGAAGATGGGTTTGATTAGCCTCACCTATGATTCATTCTACCAGTTCATGTTTTATTCATCAAAACTCAATCTACTCGTGGTCGAGATTTCTGCCTTAGCCATGTCCTATCATCTGTATAGTGCAATTCGTCATTTATTCGTATGA 405 0.3975 MLLGVNGMMTRSFERGVDADTLGLAGHKRFMSDIPSKPNETKSYGLRPLSPHLPVYEPQLSATLSIFNRIGGAFIAIVIVLFYMIYVKMGLISLTYDSFYQFMFYSSKLNLLVVEISALAMSYHLYSAIRHLFV. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05186 134 CDD SQR_TypeC_SdhC 47 133 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Seca4g05186 134 PANTHER SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT 41 133 IPR014314 GO:0000104|GO:0006099|GO:0009055|GO:0045281
Seca4g05186 134 Pfam Succinate dehydrogenase/Fumarate reductase transmembrane subunit 47 134 IPR000701 GO:0016627
Seca4g05186 134 Gene3D Fumarate reductase/succinate dehydrogenase, transmembrane subunit 37 134 IPR034804 GO:0016020
Seca4g05186 134 FunFam Succinate dehydrogenase subunit 3-1, mitochondrial 32 133 - -
Seca4g05186 134 SUPERFAMILY Fumarate reductase respiratory complex transmembrane subunits 42 133 IPR034804 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05186 Seca-Chr4 96908364 96911343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05186 K00236 K03885 gmx:100527396 212.616