Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05175 ATGGGTGTTATGTTGAAGCTGGTAGACGCCATTCTGTTCCTGTTCTTCCTGTTGATAGCATTGGTGGCTCCTCTCATAGATGCTCAGACATGTCTTCCCCTTTCTTACTTCCCTGAATTCCTTGTCCAACTTAAGACATGGTACACCCAAGAATATGGTGACTACCTTGTGTCTGAAAAGCCCCATTTCTTCGTTGGCCTTGTTTGGCTTGAGCTTCTCTTCCAATGGCCTCTTGCACTCCTCAATCTCTATGCCATTTTATCTTCTAAGCCCTGGTTCAACACCACTTGCTTGATCTATGGTGTCTCTGTCTCCACTTCCATGGTTGCTGTATTATCAGAAATGATGCTTTCCAATAAGGCATCTGATAAGCTATTGTCAATGTATGTCCCTTTCATGGGTTTGGGTGTTTTAGCTACTCTGCGAGGGTTGCTGGCACATTCCTCCAAGGCTACTTCAGCTCATGGCAAGAGACCTGCAATGGCAAGGAAAAAGCGAGCTTGA 504 0.4544 MGVMLKLVDAILFLFFLLIALVAPLIDAQTCLPLSYFPEFLVQLKTWYTQEYGDYLVSEKPHFFVGLVWLELLFQWPLALLNLYAILSSKPWFNTTCLIYGVSVSTSMVAVLSEMMLSNKASDKLLSMYVPFMGLGVLATLRGLLAHSSKATSAHGKRPAMARKKRA. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05175 167 PIRSF TMP_97 1 158 IPR016964 -
Seca4g05175 167 ProSiteProfiles EXPERA domain profile. 8 140 IPR033118 -
Seca4g05175 167 PANTHER SIGMA INTRACELLULAR RECEPTOR 2 1 166 - -
Seca4g05175 167 Pfam EXPERA (EXPanded EBP superfamily) 40 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05175 Seca-Chr4 96708894 96710877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05175 K26171 - psat:127106025 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05175 4 96708894 96710877 Seca4g05175 4 96708894 96710877 ECH