Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05171 ATGGATCATTCTATGAATTATCCATCTAGAGGCAACGCAGTAACTGCCAGCAAAACCCAAATTGGTGATCCTCCTGAAGAAAGTGGATGGACATCTTACTTTGAAGATTTCTCAAAAGGCATAGATCAGCCCAGTCACTGTTCCAGTTTGGGTGGCTCCTCTTTACTCTCAGATGCTGCTTCTTCTGCTGCATGGAAATTCAATTCTCATCATGTTTCAGATAGGGCTGCACCAAATCTCCCTAAGAAGCTTTGTTTCAAGAAAGCAAGAACCAAACAAATATCACAAGATGACCCTTTGGAGGACACTGCTAGCTCTCCTGTTAATAGCCCCAAGGTAGTGATAGACTTGAGTCCAACCAGGAAGATTGATGAACAATTAGAAGGTTCTATGGGTAAAGGATTCACATCATCAGAGAATTATTCAGATTTGCAGAGGGATGATAAGCATGGAATAGAATTTAATGGAAAGAATAATATTGATTGCACAGACTTGAAGAAAAGGGGGCTCTGTCTGGTTCCTTTGTCTTTGTTGGTTAATTATTTGGGGTGA 552 0.4076 MDHSMNYPSRGNAVTASKTQIGDPPEESGWTSYFEDFSKGIDQPSHCSSLGGSSLLSDAASSAAWKFNSHHVSDRAAPNLPKKLCFKKARTKQISQDDPLEDTASSPVNSPKVVIDLSPTRKIDEQLEGSMGKGFTSSENYSDLQRDDKHGIEFNGKNNIDCTDLKKRGLCLVPLSLLVNYLG. 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05171 183 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 183 IPR039280 GO:0010089
Seca4g05171 183 MobiDBLite consensus disorder prediction 1 29 - -
Seca4g05171 183 MobiDBLite consensus disorder prediction 88 112 - -
Seca4g05171 183 MobiDBLite consensus disorder prediction 1 26 - -
Seca4g05171 183 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05171 Seca-Chr4 96612088 96613805 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05171 - - gmx:100786184 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05171 4 96612088 96613805 Seca4g05171 4 96612088 96613805 ECH
Seca4g05171 4 96612088 96613805 Seca4g05171 4 96612088 96613805 PCT