Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05170 ATGGGTAACCCCAAATATCCCTATTATTACCCAGAACCAGAAACCATGTGTACTAGAGGCCTCAAAATCTGCTTGGCTGTGACTTCATTTTTCTTGGTCATTGTTGCCATTCTGATTTTGATCTTATCTCTCACCATCTTTAAACCCAAGGACCCATATGTAAGTGTCCACCCTGTTGGCCTTGAGAACCTAGACTTATTTTCAACCAACTCAACAAGTGTACCTCTAGATATGGTGATCACAATAGTGAACCCAAACTATGGAGGCTTCAAGTGGGAAAATTCTACTGGTTATCTTAAATATCAAGATACCATCATAGCCAAAGTTCCAATAGAGACAAAATCCATCCCTGCTCATAGCATGACTAATGTGAGCACTTCTGCAGGTCTTATGAGTGGAAAATTGACATCTGATTCAAAGTTTTGGTCAGATATTGAAGATGGGGGCTTGAATTTCACATCAAATGCCACACTGCATGGGAAAGTGCATATGCTCAAAGTTTTCAAGTTGAAGGCCACTGTTTATATCTCATGTGACATCTCTTTTAACATAAGCTCCATGAGTTCTGATTCCAGCTGCATATCCAAAATCAAGAAGTGA 600 0.3967 MGNPKYPYYYPEPETMCTRGLKICLAVTSFFLVIVAILILILSLTIFKPKDPYVSVHPVGLENLDLFSTNSTSVPLDMVITIVNPNYGGFKWENSTGYLKYQDTIIAKVPIETKSIPAHSMTNVSTSAGLMSGKLTSDSKFWSDIEDGGLNFTSNATLHGKVHMLKVFKLKATVYISCDISFNISSMSSDSSCISKIKK. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05170 199 SUPERFAMILY LEA14-like 34 165 - -
Seca4g05170 199 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 186 - -
Seca4g05170 199 Gene3D - 40 184 - -
Seca4g05170 199 Pfam Late embryogenesis abundant protein 80 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05170 Seca-Chr4 96563582 96564181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05170 - - ccaj:109790423 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05170 4 96563582 96564181 Seca4g05170 4 96563582 96564181 PCT