Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05153 ATGGGAGGCACTATTACTATTCATTATTATGTTTCTCTTGTTATTCCAGTTAATGGTAGGAGAGACTATTCAGGTAATGACTTGAGAGATAAACTTGATAGGAGGCATTTATCTCCTCGAAGGTACTCACCAGCTCGAGATGCAAGAGGCCGCCAGACCATCCGCGAATACAGTCCCCTAAGGTCCTTGGAGAAAAAAGGTTGCAGTGACAGAAAACATAGGAGAAAACAAGGCATTACTGGTCAAAGTGATATTTCTGGAAGTTTGAAAATATCAGATAGAATCCAAGATCGGGTTAAAGAAGGAAAATTGCTTTCCTCTGATTCTAGAAACACTCTTGAGGAGCAGCTGAAGAAAGTACATTCTGATATCAACACACTTGAGAACCGAAAGTTCCAACTAGCGGTCTACTTAGATGAGAGTGTACAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAGGCTCAATTGTGCAAAGAGAATGAGGAGTGTAAAAGAATTACTTCAAGAATAAAGAAGTTTGTTAGAGTGCACAATCATAATTCACAGTTACAAGATGAACTGAAAAGATCACAGGCTCGAATTCAAAGATTTGGAGATCAGCTTGTGTCAGACATTTCTAGAATTGGTGCTAATGAGGAAGATTTAAGCGTTGATATTGTAAGCAATGGTGAGAATACTGGTCTTCCTCCAATCATCAAACATAATTTGGAGCAGAATGATGCATCTCCCCTCAGAAAAAGGCTGCATGTGGAACGAGATGCTGTGGAAGAGTTAAAACAAGATAGATCAAAAGTTGGGCATTTGGTTGAGACAGCAAGAACCAGGAAGCGTTCTCGCTGGAATTTGTCTGCTCAATTGAATGACCATGGTTACATAGGCCTTGAGGCCCCAAATAATGGAACTGAAGTTACTAGGCCCCTAGAAATTGAAGGCAAGCACAAGAAAGGAATATGGAATTCTTCGAACAACCTTCATTCAGAAAAGTTGAAGGAATCCAGGATTGAAGTGCCATCAACCAGCATGGCAGCTCATGTGCTTGATGAGGAAGTTGAGATTGAACATGATGATGGAATTGATATCAATGAAACTGCAAACCTGGAAAATGAGAATGGAGTGATACATGAGATGAAGGGTGTACCTCTTATGCTTCCCCCAACTTTGATTCCTCGTAGCAATTACTCACAGTATGTAGGTAATGACGAGAATGTAGATGTGGATGGTGTTGATGAAGAAGCAGCAGGGGCACATGTGGACATAGTCTAA 1272 0.4057 MGGTITIHYYVSLVIPVNGRRDYSGNDLRDKLDRRHLSPRRYSPARDARGRQTIREYSPLRSLEKKGCSDRKHRRKQGITGQSDISGSLKISDRIQDRVKEGKLLSSDSRNTLEEQLKKVHSDINTLENRKFQLAVYLDESVQEVDSLNSRIQELEAQLCKENEECKRITSRIKKFVRVHNHNSQLQDELKRSQARIQRFGDQLVSDISRIGANEEDLSVDIVSNGENTGLPPIIKHNLEQNDASPLRKRLHVERDAVEELKQDRSKVGHLVETARTRKRSRWNLSAQLNDHGYIGLEAPNNGTEVTRPLEIEGKHKKGIWNSSNNLHSEKLKESRIEVPSTSMAAHVLDEEVEIEHDDGIDINETANLENENGVIHEMKGVPLMLPPTLIPRSNYSQYVGNDENVDVDGVDEEAAGAHVDIV. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05153 423 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 17 411 IPR045868 GO:0046872
Seca4g05153 423 MobiDBLite consensus disorder prediction 24 85 - -
Seca4g05153 423 MobiDBLite consensus disorder prediction 24 67 - -
Seca4g05153 423 Coils Coil 138 165 - -
Seca4g05153 423 Coils Coil 110 130 - -
Seca4g05153 423 Coils Coil 183 203 - -
Seca4g05153 423 SUPERFAMILY Troponin coil-coiled subunits 96 173 IPR038077 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05153 Seca-Chr4 96242695 96252061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05153 - - gmx:100811131 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05153 4 96242695 96252061 Seca4g05153 4 96242695 96252061 ECH