Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05117 ATGGACAAGGAAATAGACACCTTCCTCAAGAAGCTCTCTTTTGGAGCCATAGCCATAGCTTCCGTGACCCTCCTCTCCCTCTTCCTCCGAACCCCCGACTCATGCGTCCCACCCGACGCACCTCCCAAGCCTCACCTCCGTTTCCCTAAATCCTCCTGCGACTTCCACTCCACGCGCCCCCACGTCCCCCTCGACAAGAAGAACCACCGCCTCTGGTCCTCCCGCGACTGGCGCAACAAGGTCCACTCCTTCTCCCTCCTCTTCTTCCCCCTCCGCGATCTCGGCCTCCTCCGCAATCACTCCAAGGTCCTCTGCATCTCCGCCAGCGCCGGCCACGAGGTCGCCGCGATGTCCCTCCTCGGCGTCGAAGATGTCACCGGCGTCGAGCTCCTCGATTCCCCTCCCCTCGTCCAGCGCGCTGATCCTCACAATCTTCCCTTCTTCGATGAGGCCTTCGACCTCGCCTTCACCGCCCGATTCGACCTGGCGCTTTTCCCGGCGCGATTCGCGGCCGAGATGGAGCGCACCGTCAGGCCCGGTGGCGTGTGTTTCGTTCTTGTTGAAGAGTGTGGGATCGATGAGGTAAGAGAGGTTGTGCGTTTGTTTAGGAATTCGAAGCTTGTTAGCTCCAGTAATGTTACTTTAATTGGAATGAGAATGACCGGTATTCTTATGAGAACCAGAAAATCTTCTTCTTGA 699 0.5808 MDKEIDTFLKKLSFGAIAIASVTLLSLFLRTPDSCVPPDAPPKPHLRFPKSSCDFHSTRPHVPLDKKNHRLWSSRDWRNKVHSFSLLFFPLRDLGLLRNHSKVLCISASAGHEVAAMSLLGVEDVTGVELLDSPPLVQRADPHNLPFFDEAFDLAFTARFDLALFPARFAAEMERTVRPGGVCFVLVEECGIDEVREVVRLFRNSKLVSSSNVTLIGMRMTGILMRTRKSSS. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05117 232 Gene3D Vaccinia Virus protein VP39 99 229 IPR029063 -
Seca4g05117 232 PANTHER F21J9.14 1 231 - -
Seca4g05117 232 CDD AdoMet_MTases 102 190 - -
Seca4g05117 232 Pfam Methyltransferase domain 137 185 IPR013216 GO:0008168
Seca4g05117 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 95 190 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05117 Seca-Chr4 95601273 95601971 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05117 - - mtr:25492107 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05117 4 95601273 95601971 Seca4g05117 4 95601273 95601971 ECH