Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05113 ATGCCAGAGGCTCCTAACCACTACCTCAGCAGCAACCAAAATGTCGAACTTGATGATGTTAGTAATACTATCATCGTCAAGGACAACAATAAAAAAGCACTGCAATACATTGAGGATGTTACCAGCAACGCTGATGAAATTCAAGAAAGGGTCCTTGCTGAGATCCTTTCTACTAGTGCTCAAGCTGAGTACCTGCAACGCCATGGCCTAGATGGTCACACAGACAGAGACACTTTCAAAAAGGTCATGCCTGTGGTGACTTACGAGGATTTAAAGCCAGATATTGATCGGATAGCGAATGGTGACACCTCTCCAATTTTATGCTCCAAACCCATATCGGAGTTCCTCACTAGTTCTGGAACATCTGGTGGGGAGAGAAAATTGATGCCAACCATAGAAAATGAGCTAGAGAGGAGGTCATTACTCTATAGCCTTCTGATGCCAGTGATGGACCAATTTGTACCCGGTTTGGACAAAGGCAAAGGGATGTACTTTTTGTTCATAAAATCAGAAGCCAAAACCCCTGGTGGACTCCTTGCTCGTCCAGTTTTAACAAGCTACTACAAAAGCTCACACTTTAAGGACAAAACACATGGACATGATCCCTATACAAACTACACTAGCCCCATTGACACCATTCTCTGCTTAGATTCTTACCAGAGCATGTACTCTCAGCTTCTCTGTGGTCTCTATCAAAACGACCAAGTCCTTCGTGTTGGGGCTGTTTTCGCTTCTGGTTTCATCCGTGCCATTAAATTCCTCGAAAAGCATTGGGTTTGTTTGTGTAATGACATAAGAACGGGTACCATAAACGCTGAAATCACTGAAACTTCAGTGAGAGAGGCTGTAATGAAAATACTGAAACCGAATCCCAAGCTTGCGGATTTCATAGAAGCTGAATGCAAGAAAGAGTCATGGAAAGGGATCATTACTAGGTTATGGCCAAATACTAAGTATGTTGATGTTATTGTCACTGGAACTATGTCTCAGTATATTCCAATATTGGATTACTATAGCAATGGGCTCCCTCTTGTCTGCACCATGTATGCTTCTTCTGAGTGTTACTTTGGCCTCAACTTAAACCCTTTGTGTGAGCCAAGTGAGGTGTCTTACACACTCATTCCCACCATGGCCTATTTTGAGTTCTTGCCTGTTAACAAGATCTGTGGACATACCAATTCAGTTTCTAACACAGAGCAAAAGCATTTAGTTGATCTCGTAGATGTGGAGTTGGGTCATGAATATGAGCTTGTGGTCACCACTTATGCAGGCCTTTACAGGTATCGGGTGGGTGACATACTCCGTGTAGCAGGATTCAAGAACAAGGCTCCTCAGTTCACCTTCGTATGCCGAAAGAACGTAGTCTTGAGCATCGATTCCGATAAAACAGACGAAGTTGAGCTACAAAATGCTGTGAAGAATGGCGCTAACAATCTACTACAATACGGTGCATCACTCACAGAGTACACAAGCTGCGTTGACACGTCAACTATCCCAGGCCACTACGTGCTTTACTGGGAGATTAGCACGAACAAGGAGCAAACCCCAATTCCTGCCTCTGTTTTTGAGGACTGTTGCTTTGAAGTTGAAGGGTCTCTCAACAGCGTGTATCGTCAAGGCAGGGTATCAGAATCCATTGGGCCATTGGAAATCAAGATAGTTGAGAATGGGACATTTGATAAGCTCATGGACTTTGCTCTCAGCCAGGGTGCATCTATAAATCAATACAAGACACCTCGCTGTGTCAAACATGCTCCCATAATTGAGCTTCTAAACTCCAAAGTAGTTTCCACTTACTTCAGCCCAAAATGCCCTCAATGGGCTCCTGGTCACAAGAAGTGGTGCACCCTTGACTGA 1857 0.4394 MPEAPNHYLSSNQNVELDDVSNTIIVKDNNKKALQYIEDVTSNADEIQERVLAEILSTSAQAEYLQRHGLDGHTDRDTFKKVMPVVTYEDLKPDIDRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIENELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFIKSEAKTPGGLLARPVLTSYYKSSHFKDKTHGHDPYTNYTSPIDTILCLDSYQSMYSQLLCGLYQNDQVLRVGAVFASGFIRAIKFLEKHWVCLCNDIRTGTINAEITETSVREAVMKILKPNPKLADFIEAECKKESWKGIITRLWPNTKYVDVIVTGTMSQYIPILDYYSNGLPLVCTMYASSECYFGLNLNPLCEPSEVSYTLIPTMAYFEFLPVNKICGHTNSVSNTEQKHLVDLVDVELGHEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFTFVCRKNVVLSIDSDKTDEVELQNAVKNGANNLLQYGASLTEYTSCVDTSTIPGHYVLYWEISTNKEQTPIPASVFEDCCFEVEGSLNSVYRQGRVSESIGPLEIKIVENGTFDKLMDFALSQGASINQYKTPRCVKHAPIIELLNSKVVSTYFSPKCPQWAPGHKKWCTLD. 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05113 618 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 30 604 IPR004993 -
Seca4g05113 618 Pfam GH3 auxin-responsive promoter 37 584 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05113 Seca-Chr4 95564009 95567258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05113 34 601 EF-hand Containing Proteins AT1G23160 50.260 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05113 K14487 - gmx:100819676 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05113 4 95564009 95567258 Seca4g05113 4 95564009 95567258 ECH
Seca4g05113 4 95564009 95567258 Seca4g05113 4 95564009 95567258 PCT