Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05071 ATGATAATGTTAACATCTTTCTTGGGGTTATCCAATGGTTACCTCACTGTCTGTGTTCTCACTTCTGCACCAAAAGGTTACAAGGGACCAGAACAAAATGCCTTGGGAAACCTATTGGTATTGTTTCTTCTAGGAGGTATTTTTGCAGGGGTAACACTTGACTGGTTGTGGTTAATAGGTAAAGGGTGGTGA 192 0.4115 MIMLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW. 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05071 63 Pfam Nucleoside transporter 2 57 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca4g05071 63 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 1 57 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05071 Seca-Chr4 94531408 94531694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05071 1 61 Organic Solute Cotransporters AT4G05110 85.246 7.02e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05071 K15014 - mnt:21405035 118.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05071 4 94531408 94531694 Seca4g05071 4 94531408 94531694 ECH
Seca4g05071 4 94531408 94531694 Seca4g05071 4 94531408 94531694 PCT