Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05051 ATGGCTTCTGAATTCTTGAACAATTTTAAGATTCCGGATTACATTCTTGTATCGGAGTCCAAGGTTGAGAAAGTCGATTATTGTGGTCATGTGCCTCAATGTCCGGTGCTGGTTTTTGTTAACTCCAAGAGTGGTGGTCAGCTCGGAGGGGACCTCTTACAAACTTATCGTACACTTCTTAATGAAAAACAGGTTTTTGATTTGGGGGAACTTGCTCCTGATAAAGTGCTGAGATCAATCTATGCTAACTTGGAAAGACTCAAGCAACGGGGTGATCAGTTTGCTATAAGGACCATGGAGAAGTTGAAGTTAATTGCTGCAGGGGGCGATGGAACAGCAGGCTGGTTACTTGGAGTTGTTTGTGATCTCAAATTATCTCATCCGCCAGCAATAGCTACTGTTCCCTTGGGCACAGGGAATAATCTACCTTTTGCGTTTGGTTGGGGGAAGAGAAACCCAGGAACAGATCAACGCTCAGTTGAGGCATTCTTAGATCAAGTCATGAAAGCTAAGGAAATGAAGATAGACAACTGGCATATTCTCATGAGGATGAGAGCTCCAAAAGAAGGTTCCTGTGATCCAATTCCACCGCTTGAGCTACCACATTCTCTGCATGCCTTCCATCGTGTATCTGAAGCAGATGAACTTAATATGGAAGGTTGCCACACTTTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTATCTTATGCATTTCATTCTGAACGAAAGATGAATCCTGAAAAATTCAAAAACCAGTTGGTTAATCAGAGCACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTATGGCTTCCCTATTCCATCCTTCTTCCAGGAACATAGCTCAACTTGCAAAAGTAAAATTCATGAAAAAAAATGGTCCATGGCAAGACCTGAAAATACCTCCCAGCATCCGGTCAATCGTATGTCTTAACTTGCCCAGCTTTTCTGGTGGATTCAATCCATGGGGTACACCGAACAGGAGGAAACAGTCTGACAGAGATTTGACACCACCTTATGTGGATGATGGCCTTATAGAGGTTGTTGGTTTTAGAAATGCGTGGCATGGGCTTGTTTTGCTTGCTCCAAAGGGACATGGAACTCGTCTTGCTCAGGCACATAGAATCCGGTTTGAGTTTCGCAAAGGTGCAGCTGATCATACATTCATGAGGATCGATGGAGAACCTTGGAAGCAACCTCTTCCAGTTGATGATGATACTGTTGTGGTAGAGATTTCTCACCTTGGCCAGGTCAACATGCTTGCCACTCATAATTGCAAGTCTAAAAGTGTGTATGATCCGTCATCACCACACCATGATGATGACGAAGATGACAGTGATGAAGAAGACTCTATATCAGACGAATTTCGGAAGTTTGGTGCAGCAGATACATTTAAAATCCCAGATGAGGTTGATCTTTCTCATCTTAGTTAG 1452 0.4325 MASEFLNNFKIPDYILVSESKVEKVDYCGHVPQCPVLVFVNSKSGGQLGGDLLQTYRTLLNEKQVFDLGELAPDKVLRSIYANLERLKQRGDQFAIRTMEKLKLIAAGGDGTAGWLLGVVCDLKLSHPPAIATVPLGTGNNLPFAFGWGKRNPGTDQRSVEAFLDQVMKAKEMKIDNWHILMRMRAPKEGSCDPIPPLELPHSLHAFHRVSEADELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKMNPEKFKNQLVNQSTYAKLGCTQGWFMASLFHPSSRNIAQLAKVKFMKKNGPWQDLKIPPSIRSIVCLNLPSFSGGFNPWGTPNRRKQSDRDLTPPYVDDGLIEVVGFRNAWHGLVLLAPKGHGTRLAQAHRIRFEFRKGAADHTFMRIDGEPWKQPLPVDDDTVVVEISHLGQVNMLATHNCKSKSVYDPSSPHHDDDEDDSDEEDSISDEFRKFGAADTFKIPDEVDLSHLS. 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05051 483 SMART dagk_c4a_7 35 178 IPR001206 GO:0016301
Seca4g05051 483 Pfam Diacylglycerol kinase catalytic domain 35 160 IPR001206 GO:0016301
Seca4g05051 483 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 33 409 IPR016064 -
Seca4g05051 483 Gene3D - 34 181 IPR017438 -
Seca4g05051 483 FunFam Diacylglycerol kinase 34 177 - -
Seca4g05051 483 PIRSF DAG_kinase_plant 2 433 IPR016961 GO:0004143
Seca4g05051 483 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 31 184 IPR001206 GO:0016301
Seca4g05051 483 PANTHER DIACYLGLYCEROL KINASE 31 432 IPR037607 GO:0004143|GO:0007165
Seca4g05051 483 FunFam diacylglycerol kinase 227 408 - -
Seca4g05051 483 Gene3D - 227 410 - -
Seca4g05051 483 SMART dagk_c4b_2 230 402 IPR000756 GO:0004143|GO:0007205
Seca4g05051 483 Pfam Diacylglycerol kinase accessory domain 228 402 IPR000756 GO:0004143|GO:0007205
Seca4g05051 483 MobiDBLite consensus disorder prediction 435 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05051 Seca-Chr4 94100796 94107915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05051 3 481 Acyl Lipid Metabolism Gene Families AT2G20900 77.066 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05051 K00901 - gmx:100817198 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05051 4 94100796 94107915 Seca4g05051 4 94100796 94107915 ECH
Seca4g05051 4 94100796 94107915 Seca4g05051 4 94100796 94107915 PCT