Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05050 ATGAGATACAAAAGATCATACCGCTATGATCCTGTATTTGCTCTTGGCTTTGTCACTGTATATGAGCAACTCATGGAAGGGTATCCTAGTGATGAGGACCGAGATGCCATCTTCCAAGCATACATTAACGCATTGAAGGAAGATCCAGAGCAGTACAGAGTAGATGCACAGAAGTTGGAAGAGTGGGCTCGGGCTCAAAACCCAACTTCCCTGATTGAGTTTTCATCCAGAGAAGGAGAAGTTGAAGGGATATTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAATAGGCCTTTTTCGTCTTCTTGAGTTGGCAAATGCAATGGAACCAACAATTTTGGAAAAGCTTTGTGCGGCTTTGAATGTCAACAAAAGAAGTGTGGATCGGGACTTGGATGTGTATCGTAATCTGCTTTCTAAGTTGGTTCAAGCTAAAGAGCTTCTAAAGGAATATGTTGACAGGTAA 495 0.4202 MRYKRSYRYDPVFALGFVTVYEQLMEGYPSDEDRDAIFQAYINALKEDPEQYRVDAQKLEEWARAQNPTSLIEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAALNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDR. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05050 164 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 164 IPR017499 GO:0010207|GO:0015979
Seca4g05050 164 Pfam Thylakoid formation protein 2 163 IPR017499 GO:0010207|GO:0015979
Seca4g05050 164 Coils Coil 144 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05050 Seca-Chr4 94095948 94099312 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05050 - - gmx:100779964 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05050 4 94095948 94099312 Seca4g05050 4 94095948 94099312 ECH
Seca4g05050 4 94095948 94099312 Seca4g05050 4 94095948 94099312 PCT