Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05048 ATGGCTGTGGACAGTGAAAAAACAGGCTCTGATGGAAAAGTTTGGAGCTTTTGTAGCATGCCATTTTGGCAAACAACTCATGCTTCTTCATCTTCTCCTTCAACATCTTCTATGCATAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCAACTCATCAACCTTCCAGCACTGTTTCTTCCGTGGCCAAGTCTCTGTTCCCGACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCCTATGAACCTGGTAAGCAAGTTAGAAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCCTTCAAGTTTCAAACAACTGCCCCCAAGAGTTGTTATATGCGCCCTCCAGGTGGTATTCTTGCACCTGGTGAAAGTATAATTGCAACTGTATTTAAATTTGTGGAGCCACCTGAGAGCAATGAGAAACCAATTGATCAAAAAAGCAGGTTTGAAGAGCAAAGGGATCAAGTAACAGTGGAGCAAATATTGCGTGTGGTTTTTCTGGACCCTGAACGACCTAGCCCAGCCCTGGATAAGCTTAAACAGCAACTGGCTGAGGCTGAGGCTGCATTAGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAATAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAGGCAGCAGGTTGAAGGGGTTGATTCAATGTAA 732 0.4495 MAVDSEKTGSDGKVWSFCSMPFWQTTHASSSSPSTSSMHSVHQQSQILQSLDRSTHQPSSTVSSVAKSLFPTRRRLRLDPPNKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPESNEKPIDQKSRFEEQRDQVTVEQILRVVFLDPERPSPALDKLKQQLAEAEAALEARKKPPEETGPRIAGEGLVIDEWKERRERYLARQQVEGVDSM. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05048 243 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 74 237 IPR016763 GO:0005789
Seca4g05048 243 MobiDBLite consensus disorder prediction 198 217 - -
Seca4g05048 243 MobiDBLite consensus disorder prediction 26 66 - -
Seca4g05048 243 Gene3D Immunoglobulins 71 181 IPR013783 -
Seca4g05048 243 SUPERFAMILY PapD-like 64 184 IPR008962 -
Seca4g05048 243 Pfam MSP (Major sperm protein) domain 76 151 IPR000535 -
Seca4g05048 243 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 194 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05048 Seca-Chr4 94024863 94026988 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05048 - - gmx:100820576 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05048 4 94024863 94026988 Seca4g05048 4 94024863 94026988 ECH
Seca4g05048 4 94024863 94026988 Seca4g05048 4 94024863 94026988 PCT