Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05040 ATGAACATGAAGAGCCCCTCTAATGACTTGGTATCTACGGTTTCTCCGAAACCTAGAACCCGTCAAGTGAGTTCCCGCTACTTGTCTCCATCTCCAACAGAACCCGGTTCAGCATCTCCCACCGACTCACGGCGTTGGCTGAAGACAAACTCCGGCACTCTCGCTGATCACATCGGCAATGACAGGCTTAAGGACAGAGAGGAACACCACCTTCATTGTCAGAATAAAAAACCCACGACAACACCAACCTCTGTTTTCCCTGTTCTCAGGAAACAGAGAAGTTGCAGGGAGTTCAACAATTCCGAGAATGAGAATGATCAAAATCAAACCTTTATTGGCAGGTCCAAAAGATACAGTTTTCCTGAAAAATCTTCCTCTTCTCGATCTTCATCTGTAAAGAAAACAAGCTGTGATGATTCTGGTGTGGTTTCGGGAAGACTGTCTCTGGATGAGAATGCTTTTTCTTCTGATGATTCATGGATGGTGAAGAAGCTCATCACACAAAAAGTAATAAAGAGGGCTAATTCCCTTACTGGGTACATGAGCTCCCAGTCTCAGTGGGCTTTGTCCCCTGGTAGGACAGGGTCACCTCCCATGTCTGTGGAAAGTAAGGGAAAGCCCTTGTCTTTTTCAAGCTTGAGGCCTCCCAACAAGAGTGTGGAGAAGATTCTGAACATGGGTTTTGACCTTTTCAGGAATAAAAAATCTTCAGTTAGTTCTTCCTCATCGTCTGAGGCCTTTTATCAGCTACGTCTGCTTGATAACAGGTTGCTCCAGTGGCGGTTTGCAAATGCAAGAGCTCATGCTGTGAATCACTGTATTTCTCTTCAGGCAGAGAGAAATTTGATATATGCTTTGGATGGTCTTACAAAGTTGAGAGGTTCCGTGCTGCAAAAGAAGATACAACTTGAGAGAGAAAGGCTTCAGATGAAGCTAAATTTTGTATTGCATTCCCATATGAGGTTATTGGAAACATGGGGAAGTATAGAAAGACAGCACCTAGCTGCAGTTACTGCAATGAAGGAGTGTTTGCATTCTGCTGTTTGCAAAGTTCCCCTTTTAGAAGGTGCAAAGGTAAGTTCAATAAAAGATAATTAG 1098 0.4381 MNMKSPSNDLVSTVSPKPRTRQVSSRYLSPSPTEPGSASPTDSRRWLKTNSGTLADHIGNDRLKDREEHHLHCQNKKPTTTPTSVFPVLRKQRSCREFNNSENENDQNQTFIGRSKRYSFPEKSSSSRSSSVKKTSCDDSGVVSGRLSLDENAFSSDDSWMVKKLITQKVIKRANSLTGYMSSQSQWALSPGRTGSPPMSVESKGKPLSFSSLRPPNKSVEKILNMGFDLFRNKKSSVSSSSSSEAFYQLRLLDNRLLQWRFANARAHAVNHCISLQAERNLIYALDGLTKLRGSVLQKKIQLERERLQMKLNFVLHSHMRLLETWGSIERQHLAAVTAMKECLHSAVCKVPLLEGAKVSSIKDN. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05040 365 MobiDBLite consensus disorder prediction 101 141 - -
Seca4g05040 365 MobiDBLite consensus disorder prediction 1 47 - -
Seca4g05040 365 Pfam QWRF family 123 359 IPR007573 -
Seca4g05040 365 PANTHER AUGMIN FAMILY MEMBER 126 360 - -
Seca4g05040 365 MobiDBLite consensus disorder prediction 97 141 - -
Seca4g05040 365 MobiDBLite consensus disorder prediction 186 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05040 Seca-Chr4 93890768 93894192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05040 - - aprc:113859691 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05040 4 93890768 93894192 Seca4g05040 4 93890768 93894192 ECH
Seca4g05040 4 93890768 93894192 Seca4g05551 4 104664203 104666667 PCT