Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05032 ATGAGGAAAAATGCTGGCTCTCATTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGGATTATCCCCTTTTTTGCAAGTTTGCTGGTATCTGTGAGTTTGGTTCTGACAACTATTCTTGGGGTGCCTAGTTCTGCTGGTGGGGGAGAGCAGTCACCGCTTGAAATTATTTCATTCAAGGCATCAGAGGATTCCAGTGGATATTTTGTGGAATCAGATTTGGAAAAGTCCCTTAATGCTAGTGTGGTTGTGAAAATGGATGCACCTAGGTTTGCATATCTTATTTCTGGCACCAAGGGAGATAGTCATAGGCTGATGAGGACATTAGAGGCAGTGTACCACCCAAGGAATCAATACATCCTGCATTTAGATCTTGAGGCACCACCCCGGGAAAGGTTGGAATTGGCAAATGCAGTGAAAGCTGATCCAATATTTCGTGAACTAGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCTACCATGATTGCTTGTACCCTCCAAGCTATTGCAATACTATTGAAGGAGAGTTCAGAGTGGGACTGGTTTATAAACCTCAGTGCCTCAGATTATCCTCTTGTGACACAGGATGATTTGCTTCATGTTTTCTCTAATCTGTCAAGAGATCTCAATTTCATTGAACATACACGCATTGCTGGTTGGAAACTGAACCAAAGAGCAAGACCGATCATTGTTGATCCTGCCCTTTACTTATCAAAGAAATCTGATTTAGCAATGACTACTCAACGAAGAACACTTCCCACATCTTTTAAACTGTTCACTGGTATGTCTGTATCTATAATTCTATACACATTTATTACTTTATTTTCTGCTAGTTCAGCTTGGGTTGTACTGACCCGGTCATTTGTGGAGTACTGTATATGGGGATGGGATAACTTCCCACGGACTATGCTTATGTATTATACAAATTTTGTCTCCTCACCTGAGGGATATTTTCACACTGTTATTTGTAACACTGAGGAATTCCGGCATTCAGCGATAAGCCATGATCTTCACTACATTGCATGGGACAATCCCCCGAAGCAGCATCCAATGTCTTTAACTATGAAGGACTTTGACAACATGGTTAAAAGCAAGGCTCCTTTTGCCCGAAAATTTGCAAAGGATGACCCAGTCCTAGACAAGATTGACAAAGAACTTTTGGGGCGTACACATAGATTTTCACCTGGGGCATGGTGTATTGGGACTTCAGATGGTGGGGCAGACCCTTGTTCTTTGCATGGCAATGATACAGTGTTTAGGCCAGGCCCTGGTGCTGAGAGGCTACGTGAGCTGCTTCAGGTGCTGTTATCTGAAGAATATCTAAGCAAGCAGTGTTTGTGA 1359 0.4246 MRKNAGSHSHSGRMFSDRKWIIPFFASLLVSVSLVLTTILGVPSSAGGGEQSPLEIISFKASEDSSGYFVESDLEKSLNASVVVKMDAPRFAYLISGTKGDSHRLMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPIFRELENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDLLHVFSNLSRDLNFIEHTRIAGWKLNQRARPIIVDPALYLSKKSDLAMTTQRRTLPTSFKLFTGMSVSIILYTFITLFSASSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTEEFRHSAISHDLHYIAWDNPPKQHPMSLTMKDFDNMVKSKAPFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCIGTSDGGADPCSLHGNDTVFRPGPGAERLRELLQVLLSEEYLSKQCL. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05032 452 PANTHER GLYCOSYLTRANSFERASE 17 451 IPR044610 GO:0015020
Seca4g05032 452 Pfam Core-2/I-Branching enzyme 91 367 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05032 Seca-Chr4 93787195 93792173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05032 78 451 Glycosyltransferase AT1G03520 74.064 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05032 - - gmx:100795146 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g05032 4 93787195 93792173 Seca4g05032 4 93787195 93792173 ECH